Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4307 ATGGGTTGTGTTCATGGTAAATGTTGCTGTCTGAAATCTTCGGGTGGCGTCTCTAGAAAACTTGGTTATCATCATAGCCATAGGAAGAACATACAAGCTCAGAGAGTGTTGAAAAATGTTTCTGTTCCTTCACACAACTTTGTTTTGGAGTATACCTTTCTCACGCTGCGAGGTTACTACCCTGACTCGCTGGATAAACAAAACCAAGATAGTTTCTGCATTAGGACGGAAATTCAAGGTAACCCAAATATCCATTTCTTTGGTGTTTTTGATGGGCATGGTCAATTTGGTAGTCAATGTTCAAACTTTGTTAGAGATAGGTTGGTAGAGAAGTTATCTAATGACCCTGGATTGGTGGAGGATCCTGTTCGAGCTTACAATTCTGCGTTCTCGGCAACAAATCATGAATTGCATACTAGTGACATTGATGATACTATGAGTGGTACAACGGCTATTACAGTGCTTGTTATTGGTGACACCCTTTATGTTGCTAATGTTGGTGATTCAAGAGCTGTGCTAGCTGCCAAGGGCGAGGATCGGATTATTGCAGAGGACCTGTCCTCTGATCAGACACCATTTCGGAGAGATGAATATGAGAGAGTGAAACTTTGTGGAGCAAGGGTGTTGAGTGTTGATCAAGTGGAAGGGATTAAGGATCCAAATATCCAACATTGGGGTAACGAAGAGAGTTGGGATGGTGATCCTCCGAGATTGTGGCTCCCAAATGGGATGTTTCCTGGAACTGCATTTACAAGGAGTTTAGGGGATAGATTGGCGGAGACAATTGGTGTGGTTGCAACTCCAGAGGTGTCAATAGTTCGGCTTTCACATAATCATCTCTTCTTTATTGTTGCTAGTGATGGCATATTTGAATTCTTGTCAAGCCAAACTGTTGTTGATATGGCAGCTAGATATACAGATCCTCGTGATGCATGTGCGGCTATTGCTGAAGAGTCATATAAACTATGGTCGGAACTTGTGAATCGAACAGATGATATAACAATTATCATTGTCCAGATTAAAGGACTCTCTAATAATTCAAGCACATCTGGAGTTCAATTAAGTGAGGTCAATGTCGGTACTGCTATGAGAACCAGGACAGGAACTTCTGAGATATCTACTACCACTGAATTTGATGTTTATCATTCTGTGACAAACAGTTTCTCGGATTCACAATCCTGCCATTCAAAGATCAGTTGA 1200 0.415 MGCVHGKCCCLKSSGGVSRKLGYHHSHRKNIQAQRVLKNVSVPSHNFVLEYTFLTLRGYYPDSLDKQNQDSFCIRTEIQGNPNIHFFGVFDGHGQFGSQCSNFVRDRLVEKLSNDPGLVEDPVRAYNSAFSATNHELHTSDIDDTMSGTTAITVLVIGDTLYVANVGDSRAVLAAKGEDRIIAEDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGIKDPNIQHWGNEESWDGDPPRLWLPNGMFPGTAFTRSLGDRLAETIGVVATPEVSIVRLSHNHLFFIVASDGIFEFLSSQTVVDMAARYTDPRDACAAIAEESYKLWSELVNRTDDITIIIVQIKGLSNNSSTSGVQLSEVNVGTAMRTRTGTSEISTTTEFDVYHSVTNSFSDSQSCHSKIS* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4307 399 CDD PP2Cc 66 340 IPR001932 -
Mtr4g4307 399 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Mtr4g4307 399 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 31 377 - -
Mtr4g4307 399 SUPERFAMILY PP2C-like 39 342 IPR036457 -
Mtr4g4307 399 Pfam Protein phosphatase 2C 74 319 IPR001932 -
Mtr4g4307 399 ProSiteProfiles PPM-type phosphatase domain profile. 50 340 IPR001932 -
Mtr4g4307 399 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 31 377 - -
Mtr4g4307 399 Gene3D - 49 342 IPR036457 -
Mtr4g4307 399 SMART PP2C_4 46 338 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4307 Mtr-Chr4 57153062 57157605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4307 1 345 PP2C-type Phosphatase Gene Family AT3G06270 68.300 2.43e-175 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4307 - - gmx:100797866 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4307 4 57153062 57157605 Mtr4g4307 4 57153062 57157605 ECH
Mtr4g4307 4 57153062 57157605 Mtr2g0706 2 7137723 7141557 PCT