Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4300 ATGGTAAGTGCGCGTGTTGTGGTGAGAGCGCACGTTAGTTTCTTCCCCCACCAATTCGGTGGTGTGCCCCCTTGTCCTATCCTGTCCACATCTCAAAATCCACCGCCCACCACACCACCACCCAATTATGTTACCCAACGCCTCCAACCACCAAACCCAAAACCAATTCATTCTTCCTCTTCTTTTTTCTCATCGTCACTCTTTCTCTTCCTCCTTCCAATGTCTTCCCCTCCTTCAACCACCACCCCTCCTCCTCTCTCCGATCCCCCCACCGCCGTCCCCCTCCCTCTCGCTCTCCCTGCTCCACTCCCTATCCCACCCTCCACCCGCCGTCTCCCTCCTCCCTGCTGGTCCCCCGAAGAAACACTAGCTCTCATCGACTCCTATCGTGAAAAATGGTACTCTCTTGGCCGCGGTAATCTCAAAGCCACTCACTGGCAAGAAGTCGCTGACTCTGTTTCAAATCGTTGCCCTAACGTTACTCCGGCCAAAACTCCTGTTCAATGCCGTCACAAGATGGAGAAGCTTCGGAAACGTTATCGTACTGAGATTCAACGTGCTCGCTCGCTTCCTCATTCGAGATTCAATTCAGCGTGGGTTCACTTTAAGCTTATGGATTCCATGGAGAAAGGTCCTTCTCCTGTTAAATCTGAAAACAATGATTCTGATAGTGCTGATGATGATGAAGATGAAGATCATGAGCAAGATCTGTATTTAGATATCAAAAACGGTCATGGATCTAATACTAGAAGTATCAATAAGTTGTATAAGAACGGTTTTGGTGGCGGAATAGGTGGTGGTTTTAGTGGTGGTGGTGGTGGTGGTGTTGTTGGTGGAGGATTTAGGATTAGGTATCCACCGGCACAACCTGAATCCAAATTTTCTTCTGATCAGAAATATAACCCTAATCCTAATCTGAATCAGAACTATCATACTCCACCGATGGCAACGGGGACGAAGGGATTGGGGAACAAGAGGGAAAGAGATCCATTGACTGAGGTTGTATCTGCAATTAAATTGTTGGGTGATGGGTTTGTGAGAATGGAGCAAAAGAAGATGGAAATGGCTAGGGAAATTGAAACTATGAGGATGGAGATGGAAATGAAGCGTACTGAGATGATTCTTGAATCTCAACAGCGAATTGTAGAGGCATTCGCCAAGGCAGTTTCCGACGATAGCAATAACAACAACAACAAGATGAAACCTATTAATAAGAGAATTCCATCACCACAACAACCATAA 1242 0.4678 MVSARVVVRAHVSFFPHQFGGVPPCPILSTSQNPPPTTPPPNYVTQRLQPPNPKPIHSSSSFFSSSLFLFLLPMSSPPSTTTPPPLSDPPTAVPLPLALPAPLPIPPSTRRLPPPCWSPEETLALIDSYREKWYSLGRGNLKATHWQEVADSVSNRCPNVTPAKTPVQCRHKMEKLRKRYRTEIQRARSLPHSRFNSAWVHFKLMDSMEKGPSPVKSENNDSDSADDDEDEDHEQDLYLDIKNGHGSNTRSINKLYKNGFGGGIGGGFSGGGGGGVVGGGFRIRYPPAQPESKFSSDQKYNPNPNLNQNYHTPPMATGTKGLGNKRERDPLTEVVSAIKLLGDGFVRMEQKKMEMAREIETMRMEMEMKRTEMILESQQRIVEAFAKAVSDDSNNNNNKMKPINKRIPSPQQP* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4300 413 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 74 400 IPR044823 -
Mtr4g4300 413 Coils Coil 170 190 - -
Mtr4g4300 413 Pfam Myb/SANT-like DNA-binding domain 115 208 IPR044822 -
Mtr4g4300 413 SMART 118neu2 124 213 IPR006578 -
Mtr4g4300 413 PANTHER TRANSCRIPTION FACTOR 74 400 - -
Mtr4g4300 413 MobiDBLite consensus disorder prediction 388 413 - -
Mtr4g4300 413 MobiDBLite consensus disorder prediction 210 233 - -
Mtr4g4300 413 MobiDBLite consensus disorder prediction 26 57 - -
Mtr4g4300 413 MobiDBLite consensus disorder prediction 389 413 - -
Mtr4g4300 413 Coils Coil 345 365 - -
Mtr4g4300 413 ProSiteProfiles Myb-like domain profile. 117 177 IPR001005 -
Mtr4g4300 413 Gene3D - 117 182 - -
Mtr4g4300 413 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4300 Mtr-Chr4 57099131 57100685 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4300 75 208 Trihelix Transcription Factor Family AT3G14180 33.793 4.01e-16 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mtr4g4300 Myb_DNA-bind_4 1.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4300 - - vun:114179736 347.051