Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4289 ATGCATGAATCAGACCTACATCTTATGCAGATGAAAACAATGGGAAATTATGTAAAACTACAGCATGTTAATTTAGTTAGACTTTTGGGTTACTGCACAAAAAGGAACGAGAAGCTTCTAATCTATGAATACCTCCCAAATAAAAGCTTAGATCATTATCTCATTGATCCAAGGAAATCAAATCTTCTAGATTGGACCAAGCGTGTGAATATCATTGAAGGGATTACTCAAGGCCTTCTTTATCTCCAAGAGTACTCAAATTTTACTATAATCCACCGAGATATTAAAGCTAGTAATGTTTTGTTAGACCATGAGATGAATCCAAAGATATCAGATTTTAGTATGGCTAAACTTTTTGAGAAGTATGAACTTGAAGCAAATACAAGCAGGATTGTGGGTGCTTAG 405 0.3432 MHESDLHLMQMKTMGNYVKLQHVNLVRLLGYCTKRNEKLLIYEYLPNKSLDHYLIDPRKSNLLDWTKRVNIIEGITQGLLYLQEYSNFTIIHRDIKASNVLLDHEMNPKISDFSMAKLFEKYELEANTSRIVGA* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4289 134 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 134 - -
Mtr4g4289 134 SMART tyrkin_6 6 131 IPR020635 GO:0004713|GO:0006468
Mtr4g4289 134 Gene3D Transferase(Phosphotransferase) domain 1 3 134 - -
Mtr4g4289 134 Pfam Protein tyrosine and serine/threonine kinase 11 122 IPR001245 GO:0004672|GO:0006468
Mtr4g4289 134 ProSitePatterns Serine/Threonine protein kinases active-site signature. 90 102 IPR008271 GO:0004672|GO:0006468
Mtr4g4289 134 ProSiteProfiles Protein kinase domain profile. 1 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4289 134 SUPERFAMILY Protein kinase-like (PK-like) 17 126 IPR011009 -
Mtr4g4289 134 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 18 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4289 Mtr-Chr4 57008384 57009054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4289 19 133 Receptor kinase-like Gene Family AT4G11480 62.609 2.84e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr4g4289 PK_Tyr_Ser-Thr 7.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4289 - - mtr:MTR_4g117800 246.128