Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4278 ATGCCTCCTGATCAGAGAAAAAAGTCATCTATAGATGTGGACTTCTTTACAGAATATGGTGAAGGGAGTAGATACATGATAGAGGAAGTAATAGGTAAAGGAAGCTATGGTGTGGTTTGCTCTGCATATGATACACACACTGGAGAAAAGGTTGCAATAAAGAAAATTAATGACATATTTGAACATGTTTCTGATGCTACCCGCATTCTTCGTGAGATCAAGCTTCTTAGACTCCTCCGTCATCCTGATATTGTGGAGATCAAGCATATTTTGTTACCTCCTTCTAGAAGGGAATTCAAAGATATATATGTTGTTTTTGAACTTATGGAATCAGATTTACATCAAGTCATCAAAGCAAATGATGACTTGACTCGAGAACATTACCAATTTTTTCTTTATCAGCTTCTTCGAGGTTTAAAGTATATACACACAGCAAATGTTTTTCACCGTGATCTAAAGCCAAAAAATATTTTAGCAAATGCTGACTGCAAACTGAAGATTTGCGATTTTGGTCTTGCCAGAGTAGCTTTCAATGATACACCGACTGCTATATTCTGGACAGATTATATTGCAACAAGGTGGTATAGGGCTCCTGAATTGTGTGGATCCTTTTTCTCCAAGTATACTCCGGCTATAGACATATGGAGCATTGGCTGCATTTTCGCGGAACTTTTAACTGGAAAACCTCTTTTCCCAGGGAAGAATGTTGTCCATCAATTAGACCTCATGACTGATTTCCTTGGAACACCATCTCCTGAAGCCATCGCTAGGATACGTAACGAGAAAGCTCGGAGATACTTGAGCACCATGCGTAAGAAGAAGCCAGTTCCTTTGTATCAAAAGTTTCCTAATGCAGACCCCCTTGCTCTTCGTGTGCTAGAAAGAATGCTGGCATTTGATCCTAAGGATCGACCTACTGCAGAAGAGGCTCTAGCGGATCCATATTTTAACGGTTTGGCCAAGTTTGAGAGAGAGCCTTGTGCTCAGTCAGTAAGCAAGATGGAATTTGAATTTGAGAGACGCAGGATAACAAAGGAAGACGTGCGAGAGCTTATATACAGAGAGACTCTGGAGTACCATCCAAAGATGTTAAAGGAATATCTAGAAGGAGCAGAGCCAACAGGATTCATGTATCCAAGTGCTGTGGACCACTTCAAGAAGCAATTTGCATACCTTGAGGAGCATTATGGAAAAGGTGGTACTGTTAGTCCACTTGATAGGCAACATGCATCATTACCCAGGCAGTGTGTGTTGTATTCAGACGACTCAAGACAGAATATGGCTGAGGTTGCCGCAGATGATCTCTCCAAGTGTTGCATTAAAGAAGTTGAGAAGCCGGTCATTGATAGGAGTGGTGGTGTTCCTATGAACAGGCTTCCTTTACAAGCTCCTCAAAATATTCAAGGTGTCATGACTAATCGAAGTGTTGCCCCACGGCCCAGAAAAGTTGCGGGTTCCCTATTGCATTACAATGGTGGGGTAGCAGGGGCTGACCAACGGAAGACAACTAGAAATCCATCTGTTCCAGCTCAGTATGCTGCTTCAAGCTATTCATATCCTAAAAGAAATCCAAGCTGTAAAAACGAGAGAGCAGAAGATGGAATTGAAGGTTCTAATGGACTTCAGTCGAAGCCTCAATACATAGCACGGAAAGTTGCTGCTGCTCCAGGTGGAGCTGGAAGTAACTGGTAG 1692 0.4208 MPPDQRKKSSIDVDFFTEYGEGSRYMIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYIATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPSPEAIARIRNEKARRYLSTMRKKKPVPLYQKFPNADPLALRVLERMLAFDPKDRPTAEEALADPYFNGLAKFEREPCAQSVSKMEFEFERRRITKEDVRELIYRETLEYHPKMLKEYLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVSPLDRQHASLPRQCVLYSDDSRQNMAEVAADDLSKCCIKEVEKPVIDRSGGVPMNRLPLQAPQNIQGVMTNRSVAPRPRKVAGSLLHYNGGVAGADQRKTTRNPSVPAQYAASSYSYPKRNPSCKNERAEDGIEGSNGLQSKPQYIARKVAAAPGGAGSNW* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4278 563 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Mtr4g4278 563 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4278 563 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Mtr4g4278 563 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 479 - -
Mtr4g4278 563 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4278 563 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Mtr4g4278 563 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4278 563 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Mtr4g4278 563 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 479 - -
Mtr4g4278 563 CDD STKc_TDY_MAPK 24 361 - -
Mtr4g4278 563 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Mtr4g4278 563 MobiDBLite consensus disorder prediction 515 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4278 Mtr-Chr4 56861417 56867762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4278 1 563 MAP Kinase Gene Family AT5G19010 75.130 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Mtr4g4278 Pkinase 4.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4278 - K04371 gmx:100799442 990.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4278 4 56861417 56867762 Mtr4g4278 4 56861417 56867762 ECH
Mtr4g4278 4 56861417 56867762 Mtr2g0726 2 7321526 7328051 PCT