Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4269 ATGGCACTTGTTGTTGGTAGTAGTACTATATGCAAACCCCAAATTGGATTCCTTCATCTGTCTGGGAATTTGAAGAAACAATCCGTATCGGAAATCTCATTTCCAACTCTTTCACTTTCAATTTCTACTACCTCCACTCGCTATGCACCTTCTCCATCGTTTTGCTCCACCTCCTCTGAATCTTCTGTCGAATGTAATATGCCTTCTTCAACCAAAATCTTCATCAAAGGGCTTCCTCTTTCAACCACTGAATTGCATTTAACTAAAGTGTTTTCAATGTTCGGTGAAGTTACTCAAGTCAAGCTTTTGATAGATAAAAAAACTGGGCAGTCTCTAGGATTTGCATATATTTGGTTTGTCGAGGAAGATTCTGCACAATCAGCTGCAAAAGAGATGAATGGAAAGTTGTTTTATGGCAGGTTTATTTATGTTACAATTGCAAAGCCTGGATCATCAAAAAGTTTGAAGAGAAAAGCCTACAAATTTTAA 489 0.3742 MALVVGSSTICKPQIGFLHLSGNLKKQSVSEISFPTLSLSISTTSTRYAPSPSFCSTSSESSVECNMPSSTKIFIKGLPLSTTELHLTKVFSMFGEVTQVKLLIDKKTGQSLGFAYIWFVEEDSAQSAAKEMNGKLFYGRFIYVTIAKPGSSKSLKRKAYKF* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4269 162 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL ISOFORM X1 25 162 - -
Mtr4g4269 162 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 73 142 IPR000504 GO:0003723
Mtr4g4269 162 SUPERFAMILY RNA-binding domain, RBD 61 154 IPR035979 GO:0003676
Mtr4g4269 162 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 71 149 IPR000504 GO:0003723
Mtr4g4269 162 SMART rrm1_1 72 145 IPR000504 GO:0003723
Mtr4g4269 162 PANTHER RNA-BINDING MOTIF PROTEIN, X-LINKED 2 25 162 - -
Mtr4g4269 162 Gene3D - 42 160 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4269 Mtr-Chr4 56798597 56802377 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4269 36 149 Eukaryotic Initiation Factors Gene Family AT3G11400 32.479 6.52e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4269 - - mtr:MTR_4g117350 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4269 4 56798597 56802377 Mtr4g4269 4 56798597 56802377 ECH