Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4268 ATGATGAATATATTTTCAGTGTCGGGTGCTGTTGCTTGCAAGCCTCTAGTGAGTTTCCAACCTCCACTAATGGATAACAATTCATTGTTTCAACAACATCGTAACAAGGAGAAAGTACTTGTGATCATGGGCGCCACCGCAACCGGGAAATCCAAGTTGGCAATAGATTTAGCAACACATTTTCCACCGGCAGAGATTATCAACTCCGACAAAATACAAGTTTACAAAGGACTTGACATAACAACAAACAAAGTCACAGAAGAAGAGTGTCGTGGGGTCCACCATCATTTACTTGGAACCATTGATCCTAATTCAGATTTCACATCCAAGGAGTTTTGTGAACAGGCGACGATGGCTACTGGCTCCATCGTCGCTAGAGATGGGTTACCTATTATAGCAGGTGGATCAAATTCGTACATTGAAGCTTTGGTTAATCATCATCATGAGTTTCATACAAGGTATGAATGTTGTTTTCTTTGGGTTGATGTTTCACGTCAAGTACTCCAATCATCTTTATCCACACGTGTGGATCGGATGATTGAAGCAGGTCAAGTTGACGAAGTTCGTGAAATATTTAACAAAGAAAATCATGATTATACAAGAGGGATACGAAGAGCCATTGGTGTACCTGAATTTGACCAATTTTTTAGAGCTGAGTTAGAAGGAAAAGTTGATGAAAGAACCATGAAGAAGCTTCTAGAAGTTGCTATTGATGCTCTTAAAATAAATAATATTAAGCTTGCAAATAGACAAGTTCAAAAGATTCATAGGCTTTATGGTATGTGGAAGAGGAACATGCACCGTCTTGATGCTACGGAGGTGGTGCTTAAGGAGAAAACTTGGGAGGATTGTGTTTTGACAAAGAGTCTTAGGATTGTTCACAAGTTTCTATACGATGATTGTTCAGTGCGTGTTAGAAATGGTGGTGGAAGTGGTGGTGGTTTAGTTGTGCCTGCAAATATTGGTTCTGCCACGGTGGCAACAGCAGTAACCCATTAG 999 0.4024 MMNIFSVSGAVACKPLVSFQPPLMDNNSLFQQHRNKEKVLVIMGATATGKSKLAIDLATHFPPAEIINSDKIQVYKGLDITTNKVTEEECRGVHHHLLGTIDPNSDFTSKEFCEQATMATGSIVARDGLPIIAGGSNSYIEALVNHHHEFHTRYECCFLWVDVSRQVLQSSLSTRVDRMIEAGQVDEVREIFNKENHDYTRGIRRAIGVPEFDQFFRAELEGKVDERTMKKLLEVAIDALKINNIKLANRQVQKIHRLYGMWKRNMHRLDATEVVLKEKTWEDCVLTKSLRIVHKFLYDDCSVRVRNGGGSGGGLVVPANIGSATVATAVTH* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4268 332 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 199 IPR027417 -
Mtr4g4268 332 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 165 266 - -
Mtr4g4268 332 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 26 301 IPR039657 -
Mtr4g4268 332 Gene3D - 36 297 IPR027417 -
Mtr4g4268 332 Pfam IPP transferase 150 253 - -
Mtr4g4268 332 Pfam IPP transferase 73 148 - -
Mtr4g4268 332 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 26 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4268 Mtr-Chr4 56781760 56783906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4268 152 297 C2H2 Transcription Factor Family AT2G27760 32.948 8.41e-19 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4268 K10760 - gmx:100778430 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4268 4 56781760 56783906 Mtr4g4268 4 56781760 56783906 ECH
Mtr4g4268 4 56781760 56783906 Mtr2g0749 2 7662886 7665162 PCT