Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4253 ATGATTTCAAATCATTTTGCTATCTTCCTTGTCTTCCTCTTTCTCACATCTCACTCATTTGCAGCAGACACAACTTCTTGGATCAAAGCTGGTTATTACTATTCAGGCAGTGAAATTTCAGCTTCTGACATAAAATCCAATCTTTTCACACACCTTTTATGTGCTTTTGCTTTTATAAACTCCACAAACTACAATATCTTTATTAACTCATCTGAAGAACACAAATTCTCCACCTTTACCAATACAGTAAAGCTTCAAAATCCATCTGTTACAACTCTTCTTTCAATCTACACCAAAACAGAAAACTCTTCAGTTTTTTCCTCACTGATAAACCAATCTTCTAACAGGAAATCTTTCATTGATTCTTCCATCAAAACAGCAAGAAACTATGGGTTTCAAGGCATAGACTTTCGTGGAGTTAAGCCAAAGCAAGGCAATGAACTTGCAAATTTGGCAACCCTTTTGAAGGAATTGCGAATAGCGATAACTTCTGAAGCAAGAAACACTAAAAAACCAGAGTTAGTTTTGGTGATGGCAGGTTATTATCTTAAAGCTTCAGATTCCTTTAGTTATCCTTTTGAATCAATGCAGAAGAATTTGGATTGGGTTCATTTTGTTGCATATGATTACTATCTTCCTAAAAAGGACAATTTTACGGGTTTCCACGCGGCTTTGTATGGTTCATCTGGTTGGGAAAATACTGATTCAGGTATTAAAGAGTGGAGAAAAAGAGGATTTTCTTCTCACAAACTTGTAATTGGTTTGCCTTATCATGGATTTGCTTGGACACTTGTGAAACCAGGTGAAGGTGGTGTTGGTAAACCAACTTCTGGTCCTGCTATTACAAAGGATGGTTCAATGGCTTATAAGTTGATAAAAAGTTATATTAGAAGCTTTGGTGACGGAGTAGTTTCATGTTATAATGATACTTTTGTGGTGAATTATTTTACTGTTGCATCCACTACTTGGGTTAATTTTGATGATGTGAAAGCTATTAAAGTAAAAGTATCTTATGCAAAGAAAAATGGATTACTTGGTTACAATGTTTTCCAAGTTGGGAATGATGACAATTGGATCCTTTCAAAGGCAGCTCAAGAAGTAGATGAAGATCATCATAACAGAAGGTTGCTGATAACTGTGCTGCTTACTACTCTGGCTGCTGCCATTATCTTGGGAGTAATATTTTGTTACTACCACCAAGGAACAATGACCACTGCATTTACAAGAATGATATACAAAATGAGGATATATTTATCAGCAGCTGAAGAAGATCTCAATGGAAATGGTTCTGATTTAATAGTATTTAATTATCTCACAATTAAAGTGGCAACAGATAACTTCTCAAAAGAAAATAAGCTTGGAGAGGGTGGATTTGGTGTAGTGTACAAGGGAAAATTACGGAAGGGAGAGGAAATAGCTGTCAAAAGACTATCAGAAACCTCCAATCAAGGACTTGAAGAGTTCAAAAATGAGATCACACTTACAGCAAGACTACAACATGTGAATTTAGTTAGACTTTTGGGTTACTGCACAAAAAGGAACGAGAAGCTTCTGATCTATGAATACCTCCCAAATAAAAGCTTAGATCATTTTCTCTTTGATCCAAGGAAATCAATTCTTCTAGATTGGCGTAAACGTGTGAATGTCATTGAAGGAATTACTCAAGGCCTTCTTTATCTCCAAGAGTACTCAAATTTTACTATAATCCACCGAGATATTAAAGCTAGTAATGTTTTGTTAGACCATGAGATGAATCCAAAGATATCAGATTTTGGTATGGCTAGAATTTTCGGGAAGTATGAACTTGAAGCAAACACAAGCAGGATAGTAGGAACATATGGGTATGTACCTCCGGAGTATGTCAAAAAAGGCATATACTCACCCAAGTACGACGTTTATAGTTTTGGAGTTCTTCTCTTGCAAATCATAAGTGGAAAGAGGACTTCACATTATTACGGCACACATGAAAATATGAATCTTTTGGAATACGCTTATGAGCTCTGGATAGAAGGGAGAGGCATGGAGTTTTTTGACCCTTCATTGGATGATTCAACGTCACATTGTAAAATCATGAGATGCATGCAGGTAGCTCTTTTGTGTGTTCAAGAGAACTCATCAGACAGACCTTCCATGTTAGAAGTTGATTCATTGCTCAAGAATGAAGGTGCATATGTTGGTACTCCAAATGTGCCCGCTTTTTCGATGAAAAAACATGAAGATGATAAGGGAGATACATCTAACTCCGGGTTCAAATTTTCTTCAATCAATGATGTTACAATTTCTCAAATGGTACCAAGATAA 2301 0.3611 MISNHFAIFLVFLFLTSHSFAADTTSWIKAGYYYSGSEISASDIKSNLFTHLLCAFAFINSTNYNIFINSSEEHKFSTFTNTVKLQNPSVTTLLSIYTKTENSSVFSSLINQSSNRKSFIDSSIKTARNYGFQGIDFRGVKPKQGNELANLATLLKELRIAITSEARNTKKPELVLVMAGYYLKASDSFSYPFESMQKNLDWVHFVAYDYYLPKKDNFTGFHAALYGSSGWENTDSGIKEWRKRGFSSHKLVIGLPYHGFAWTLVKPGEGGVGKPTSGPAITKDGSMAYKLIKSYIRSFGDGVVSCYNDTFVVNYFTVASTTWVNFDDVKAIKVKVSYAKKNGLLGYNVFQVGNDDNWILSKAAQEVDEDHHNRRLLITVLLTTLAAAIILGVIFCYYHQGTMTTAFTRMIYKMRIYLSAAEEDLNGNGSDLIVFNYLTIKVATDNFSKENKLGEGGFGVVYKGKLRKGEEIAVKRLSETSNQGLEEFKNEITLTARLQHVNLVRLLGYCTKRNEKLLIYEYLPNKSLDHFLFDPRKSILLDWRKRVNVIEGITQGLLYLQEYSNFTIIHRDIKASNVLLDHEMNPKISDFGMARIFGKYELEANTSRIVGTYGYVPPEYVKKGIYSPKYDVYSFGVLLLQIISGKRTSHYYGTHENMNLLEYAYELWIEGRGMEFFDPSLDDSTSHCKIMRCMQVALLCVQENSSDRPSMLEVDSLLKNEGAYVGTPNVPAFSMKKHEDDKGDTSNSGFKFSSINDVTISQMVPR* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4253 766 Gene3D Phosphorylase Kinase; domain 1 422 522 - -
Mtr4g4253 766 ProSitePatterns Protein kinases ATP-binding region signature. 453 475 IPR017441 GO:0005524
Mtr4g4253 766 Gene3D Glycosidases 42 357 - -
Mtr4g4253 766 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 27 371 IPR001223 GO:0005975
Mtr4g4253 766 CDD STKc_IRAK 453 720 - -
Mtr4g4253 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 568 580 IPR008271 GO:0004672|GO:0006468
Mtr4g4253 766 SMART serkin_6 447 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4253 766 Pfam Glycosyl hydrolases family 18 32 355 IPR001223 GO:0005975
Mtr4g4253 766 SUPERFAMILY Chitinase insertion domain 259 326 IPR029070 -
Mtr4g4253 766 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 762 - -
Mtr4g4253 766 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 7 762 - -
Mtr4g4253 766 Gene3D - 257 326 IPR029070 -
Mtr4g4253 766 Pfam Protein kinase domain 447 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4253 766 SMART 2g34 27 355 IPR011583 GO:0008061
Mtr4g4253 766 SUPERFAMILY (Trans)glycosidases 30 356 IPR017853 -
Mtr4g4253 766 ProSiteProfiles Protein kinase domain profile. 447 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4253 766 SUPERFAMILY Protein kinase-like (PK-like) 431 720 IPR011009 -
Mtr4g4253 766 Gene3D Transferase(Phosphotransferase) domain 1 523 724 - -
Mtr4g4253 766 CDD GH18_plant_chitinase_class_V 25 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4253 Mtr-Chr4 56621903 56626953 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4253 435 766 Receptor kinase-like Gene Family AT4G11530 51.335 6.36e-114 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr4g4253 Glyco_hydro_18 1e-52 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4253 - - aprc:113847882 1188.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4253 4 56621903 56626953 Mtr4g4253 4 56621903 56626953 ECH