Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4251 ATGTTTTCAAAACATTTTTCTATCTTCCTTGTCTTCCTCTTTCTCACATCTTACTCAATTGCAGACACAACTTCCTGGGTTAAATCTGGTTATTATTTTTCCAGTAATGAAATTGAAGCTTCAGAGATAAAATCAACACTTTTCACACACCTCTTATGTGCTTTTGCTTTCATAAATTCCACAGACTACAGCATCTTTATAAATGACTCTGAGTATTATAGATTCGCGTCCTTCACCAGAAGAGTAAAGCTTCAAAACCCATCTGTTACATCTCTTTTATCAATCTACACTGGAGGACAAAATTCTTCACTTTTTAACTCATTGATAAACCAATCTTCTTATAGAAAATCTTTCATTGGTTCCTCCATCAGAACAGCAAGACAATTTGACTTTCAAGGCATAGACTTTTGTGGTGCAGTGCCAAAACAGGGCAAAGATCTTGTCAATTTCGCAACCCTTTTGAAAGAGTGGCGAGTTGCGATAACTTCTGAGGCAAGTAACACTAAAAGATCAGAATTAGTGTTGGTGATGACAGGTTATTATCTTAAAGCTTCAGATTCCCTTAGTTATCCTTTTGAATCAATGCAGAAGAATTTGGATTGGGTTCATTTTGCTGCATATGATTACTATCTTCCTAAAAGGGACAGTGTCACACGTTTTCATGCAGCTTTATACGGTTCATCTGACTGGGAAAATACTGATTCAGGCATTAAAGAGTGGAGAAAAAGAGGATTTTCTTCTAACAAACTTGTAATTGGTTTGCCTTATCATGGATATGCATGGACACTTGTGAAACCAGGTGAAGGTGGTGTTGGTAGACCAACTTCTGGTCCTGCTTTTACAATGGATGGTTCAATGTCTTATAAGTTTATAAAAAGTTACATTAGAGGCTTTGGTGATGGAGTAGTTTCACGTTATAATGACACTTTTGTGGTGAATTATTTCACTGTTGCATCTACTTGGGTTAATTTTGATGATGTGGAAGCTATTAAAGAAAAAGTTTCTTATGCAAAGAAAAATGGATTACTTGGTTACAGTGTGTTCCAAGTTGGGAATGATGACAATTGGGTCCTTTCAACGGCAGCTCATGAAGTAAATGAAGATCATCATAACAGAAACAGAAGGTTGCTGATAGTTGTTCTGGTTACTGCTTTGACTGCTACCTTTCTCTTGGCAATGGTATTTTTTTGCTACTACCACAAAGGAACAGTGATTACTATTACAAGAATGATGTACAGATTGAGGATACATTTATCAGCACCTGACGAAGGTCTCAATGAAAATGGTTCTGATTTGATAGTATTTGATTATCTCACAATAAAACTTGCAACAAGTTACTTCTCAAAAGAAAATAAGGTTGGAGAGGGTGGATTTGGTGCAGTGTACAAGGGGAAATTAGGTAATGGAGTAGAAATAGCCGTCAAAAGACTCTCAAAAACCTCAAAACAAGGACTTGAAGAGTTCAAAAATGAGATCACACTTACAGCAAAGCTACAACATGTTAATTTAGTTAGACTTTTGGGTTACTGCACAAAAAGGAACGAGAAGCTTCTAATCTATGAATACCTCCCAAATAAAAGCTTAGATCATTTTCTCATTGATCCAAGGAAATCAATTCTTCTAGATTGGAAGAGACGTGTGAATATCATTGAAGGGATCACTCAAGGCCTTCTTTATCTCCAAGAGTACTCAAATTTTACTATAATCCACCGAGATATTAAAGCTAGTAATGTTTTGTTAGACCATGAGATGAATCCAAAGATATCAGATTTTGGTATGGCTAAACTTTTTGAGAAGTATGAACTTGAAGCGAATACAAGCAGGATCGTGGGAACGTATGGGTACGTGCCTCCCGAGTATGTCAGAAAAGGCATATACTCCCCGAAGTATGATGTTTATAGTTTTGGAGTCCTTCTCTTGCAAATCATAAGCGGAAAGAGGACTTCACGATATTACGGCCCACATGAAAATATGAACCTTTTGGAATATGCATATGAGCTGTGGATGGAAGGGAGAGGAATGGAGTTTGTTGACCCTTCATTGGATGATTCAACATCGCATTGTAAAATCATGAGATGCATGCAAGTAGCTCTTTTGTGCGTTCAAGAGAACTCGGAAGATAGACCATCCATGTTAGAAGTTGATTCGCTGCTCAAGAATGAAAGTGCATATGTCGGTACTCCAAACGTGCCTGCTTTTTCGATGAAAAAACTTGAAGAAGATAAGGTGGATACATTAAAATCTGGGTTCAAATTCTCTTCAATCAATGATGTTACAATTTCTCAAATGCTACCAAGATAA 2301 0.3685 MFSKHFSIFLVFLFLTSYSIADTTSWVKSGYYFSSNEIEASEIKSTLFTHLLCAFAFINSTDYSIFINDSEYYRFASFTRRVKLQNPSVTSLLSIYTGGQNSSLFNSLINQSSYRKSFIGSSIRTARQFDFQGIDFCGAVPKQGKDLVNFATLLKEWRVAITSEASNTKRSELVLVMTGYYLKASDSLSYPFESMQKNLDWVHFAAYDYYLPKRDSVTRFHAALYGSSDWENTDSGIKEWRKRGFSSNKLVIGLPYHGYAWTLVKPGEGGVGRPTSGPAFTMDGSMSYKFIKSYIRGFGDGVVSRYNDTFVVNYFTVASTWVNFDDVEAIKEKVSYAKKNGLLGYSVFQVGNDDNWVLSTAAHEVNEDHHNRNRRLLIVVLVTALTATFLLAMVFFCYYHKGTVITITRMMYRLRIHLSAPDEGLNENGSDLIVFDYLTIKLATSYFSKENKVGEGGFGAVYKGKLGNGVEIAVKRLSKTSKQGLEEFKNEITLTAKLQHVNLVRLLGYCTKRNEKLLIYEYLPNKSLDHFLIDPRKSILLDWKRRVNIIEGITQGLLYLQEYSNFTIIHRDIKASNVLLDHEMNPKISDFGMAKLFEKYELEANTSRIVGTYGYVPPEYVRKGIYSPKYDVYSFGVLLLQIISGKRTSRYYGPHENMNLLEYAYELWMEGRGMEFVDPSLDDSTSHCKIMRCMQVALLCVQENSEDRPSMLEVDSLLKNESAYVGTPNVPAFSMKKLEEDKVDTLKSGFKFSSINDVTISQMLPR* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4251 766 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 27 369 IPR001223 GO:0005975
Mtr4g4251 766 SUPERFAMILY Protein kinase-like (PK-like) 431 716 IPR011009 -
Mtr4g4251 766 ProSitePatterns Protein kinases ATP-binding region signature. 453 475 IPR017441 GO:0005524
Mtr4g4251 766 ProSiteProfiles Protein kinase domain profile. 447 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4251 766 Gene3D Transferase(Phosphotransferase) domain 1 523 727 - -
Mtr4g4251 766 CDD STKc_IRAK 453 720 - -
Mtr4g4251 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 568 580 IPR008271 GO:0004672|GO:0006468
Mtr4g4251 766 SMART serkin_6 447 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4251 766 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 762 - -
Mtr4g4251 766 Gene3D - 256 324 IPR029070 -
Mtr4g4251 766 Pfam Glycosyl hydrolases family 18 31 353 IPR001223 GO:0005975
Mtr4g4251 766 Gene3D Phosphorylase Kinase; domain 1 423 522 - -
Mtr4g4251 766 SMART 2g34 27 353 IPR011583 GO:0008061
Mtr4g4251 766 Gene3D Glycosidases 41 355 - -
Mtr4g4251 766 SUPERFAMILY (Trans)glycosidases 28 365 IPR017853 -
Mtr4g4251 766 SUPERFAMILY Chitinase insertion domain 257 324 IPR029070 -
Mtr4g4251 766 Pfam Protein kinase domain 447 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4251 766 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 16 762 - -
Mtr4g4251 766 Coils Coil 766 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4251 Mtr-Chr4 56605046 56609501 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4251 435 766 Receptor kinase-like Gene Family AT4G11530 51.929 3.34e-114 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr4g4251 Glyco_hydro_18 2.2e-50 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4251 - - aprc:113847882 1125.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4251 4 56605046 56609501 Mtr4g4251 4 56605046 56609501 ECH