Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4247 ATGGCTGATAATAAACCTAAAGTCTCACCAAAATCCACATCAAGGAGAGGAGACATCCATTCAATTCCAATTGAGGAAGTCTTCAAGCAACTAAAATGTACTAGAGAGGGTTTAACATCAGCTGAGGGAGAGAATAGGCTACAAATATTTGGTCCTAACAAGTTAGAGGAGAAAACTGAAAGCAAGTTACTTAAATTCTTGGGTTTCATGTGGAATCCACTATCATGGGTTATGGAGGTTGCTGCCCTTATGGCCATTGGATTGGCAAATGGAGGGGGAAAGCCAGCAGATTGGCAAGATTTCGTAGGTATTGTTGTGTTGCTCATCATCAACTCAACCATTAGTTTCATTGAAGAAAACAATGCAGGCAATGCCGCAGCAGCTTTAATGGCTGGCCTTGCACCCAAAACCAAGGTGTTGAGGGATGGAAAATGGACTGAACAAGAGGCGGCAATTTTAGTGCCAGGAGATTTAGTGAGCATAAAGCTGGGAGACATTGTCCCAGCTGATGCTCGCCTCTTGGAAGGAGATGCCCTTAAGATTGACCAATCTGCACTCACTGGTGAGTCACTTCCAGTTACCAAGAACCCTGGTGATGAAGTCTTCTCTGGTTCCACCTGCAAACAAGGTGAGATTGAAGCTGTTGTCATCGCCACTGGTGTTCATACCTTCTTTGGAAAGGCTGCTCACCTTGTTGATAGCACTAACAATGTTGGTCACTTCCAAAAGGTGTTGACATCAATTGGAAACTTCTGTATCTGCTCCATTGCAGTAGGAATGTTGATTGAGATTATTGTGATGTACCCAATCCAACAAAGATCATATAGAGAAGGTATTGACAATTTGCTGGTTCTTCTCATCGGAGGTATCCCGATCGCCATGCCAACAGTTTTGTCTGTGACCATGGCTATTGGATCTCACCGTTTGTCTCAGCAAGGAGCTATTACCAAGAGGATGACAGCTATTGAAGAAATGGCCGGGATGGATGTTCTCTGCAGTGACAAGACTGGAACCCTCACACTTAACAAGCTCTCAGTTGACAAAAATTTGATTGAGGTGTTCATCAATGGTGTAAACAAGGATGGTCTTCTTTTGGATGCTGCCAGGGCTTCTAGGGTTGAAAACCAAGATGCTATTGATGCTTCAATCGTTGGGATGTTGGGTGACCCCAAGGAGGCAAGAGCAGGAATCACTGAGGTTCATTTCTTGCCCTTCAATCCAGTGGGTAAACGTACAGCGATTACCTACATTGATAGTGAAGGAAATTGGCATAGATGCAGCAAGGGTGCTCCTGAGCAAATTATTGAACTTTGTGAGCTTAAGGGAGAGACTTTGAAAAAGGCTCACAAAATCATTGATCAGTTTGCTGAACGCGGTCTGCGTTCATTGGCTGTTTCTCGCCAGACTGTTTCAGAAAAGACCAAGGAGAGTGAAGGAGACTCATGGGAGTTTTTGGGTCTCATGCCACTCTTTGACCCTCCAAGGCATGATAGTGCTGAGACCATTCGACGTGCTCTTGACCTTGGTGTTAATGTTAAGATGATCACTGGTGATCAACTTGCCATTGGAAAAGAAACCGGTCGCAGACTTGGAATGGGCACCAACATGTACCCTTCATCATCTCTTCTCGGTGATAACACAGACCCTGCCATTGCATCCATCCCAATTGATGAACTCATTGAGAAGGCTGATGGATTTGCCGGAGTCTTCCCTGAACACAAATACGAGATTGTGAAGAGGCTGCAGGACAAAAAACACATTGTTGGTATGACTGGTGATGGTGTGAATGATGCACCTGCACTGAAGAAGGCAGACATCGGTATTGCAGTTGACGATGCAACTGATGCTGCAAGAAGTGCTTCTGACATTGTTTTGACAGAGCCAGGACTAAGTGTGATTGTGAGTGCGGTGTTAACTAGCAGAGCCATCTTCCAAAGGATGAAAAACTACACAATCTATGCTGTTTCTATCACCATCCGTATTGTTTTTGGATTCATGCTTGTAGCTTTGATATGGAAGTTTGACTTCTCACCATTCATGGTCCTCATCATTGCCGTCTTGAACGATGGAACCATCATGACCATCTCTAAGGATAGAGTAAAGCCATCACTAGTTCCTGATTCATGGAAGCTTAAAGAAATCTTTGCTACTGGAATTGTTCTTGGATCTTACATGGCCATTATCACTGTTGTGTTCTTCTATTTAGTTCACGACACTGATTTCTTCACCAGAGTATTTGGTGTGAAGCCAATAGCAGACTCTACTGATCACCTAAACTCAGCTCTATACCTTCAAGTGAGCATTATTAGTCAAGCACTCATCTTTGTGACAAGGTCAAGGAGTTGGTCTTATGTCGAACGTCCTGGCTTGTTGCTTCTTGTAGCCTTCTTTGCTGCACAGTTGGTGGCAACTGTCATTGCTGTGTATGCACACTGGGGATTTGCTAGAATCAATGGAATTGGTTGGAGATGGGCTGGAGTAATCTGGATCTTCACCGTTGTCACTTATATTCCTCTTGACATCCTCAAATTCATCATCCGTTTGGGATTGTCAGGCAGGGCATGGGACAACATGCTTGATAATAAGACTGCATTCACAACAAAGAAGGACTATGGAAGAGGAGAGAGGGAGGCTCAATGGGCTTTGGATCAACGCACACTCCATGGTCTCCAAGTTCCAGAATCTAAGAACAACAACCACCACCACGAGCAATCTGAAATGGCTGAGCAAGCCAAGAGACGTGCTGAAGCTGCCAGGCTGAAAGAGCTCCATACACTCAAGGGACATGTTGAATCTGTGGTGAAGTTGAAGGGTCTTGACATTGATACGATTCAACAACACTACACACTCTAA 2853 0.4437 MADNKPKVSPKSTSRRGDIHSIPIEEVFKQLKCTREGLTSAEGENRLQIFGPNKLEEKTESKLLKFLGFMWNPLSWVMEVAALMAIGLANGGGKPADWQDFVGIVVLLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWTEQEAAILVPGDLVSIKLGDIVPADARLLEGDALKIDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTSIGNFCICSIAVGMLIEIIVMYPIQQRSYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFINGVNKDGLLLDAARASRVENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVGKRTAITYIDSEGNWHRCSKGAPEQIIELCELKGETLKKAHKIIDQFAERGLRSLAVSRQTVSEKTKESEGDSWEFLGLMPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGDNTDPAIASIPIDELIEKADGFAGVFPEHKYEIVKRLQDKKHIVGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLVALIWKFDFSPFMVLIIAVLNDGTIMTISKDRVKPSLVPDSWKLKEIFATGIVLGSYMAIITVVFFYLVHDTDFFTRVFGVKPIADSTDHLNSALYLQVSIISQALIFVTRSRSWSYVERPGLLLLVAFFAAQLVATVIAVYAHWGFARINGIGWRWAGVIWIFTVVTYIPLDILKFIIRLGLSGRAWDNMLDNKTAFTTKKDYGRGEREAQWALDQRTLHGLQVPESKNNNHHHEQSEMAEQAKRRAEAARLKELHTLKGHVESVVKLKGLDIDTIQQHYTL* 951
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4247 950 ProSitePatterns E1-E2 ATPases phosphorylation site. 334 340 IPR018303 -
Mtr4g4247 950 Gene3D - 344 491 IPR023299 GO:0000166
Mtr4g4247 950 PANTHER PLASMA MEMBRANE ATPASE 18 930 - -
Mtr4g4247 950 SFLD p-type atpase 314 643 IPR044492 -
Mtr4g4247 950 MobiDBLite consensus disorder prediction 892 914 - -
Mtr4g4247 950 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 566 677 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr4g4247 950 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 104 350 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr4g4247 950 SUPERFAMILY Calcium ATPase, transmembrane domain M 18 848 IPR023298 -
Mtr4g4247 950 SMART Cation_ATPase_N_a_2 18 90 IPR004014 -
Mtr4g4247 950 PRINTS P-type cation-transporting ATPase superfamily signature 182 196 - -
Mtr4g4247 950 PRINTS P-type cation-transporting ATPase superfamily signature 332 346 - -
Mtr4g4247 950 PRINTS P-type cation-transporting ATPase superfamily signature 486 497 - -
Mtr4g4247 950 PRINTS P-type cation-transporting ATPase superfamily signature 508 518 - -
Mtr4g4247 950 PRINTS P-type cation-transporting ATPase superfamily signature 591 610 - -
Mtr4g4247 950 PRINTS P-type cation-transporting ATPase superfamily signature 614 626 - -
Mtr4g4247 950 SFLD C1.7: P-type atpase like 314 643 - -
Mtr4g4247 950 Coils Coil 901 921 - -
Mtr4g4247 950 Pfam E1-E2 ATPase 134 311 - -
Mtr4g4247 950 CDD P-type_ATPase_H 37 844 IPR006534 GO:0008553|GO:0016021|GO:0120029
Mtr4g4247 950 PRINTS H+-transporting ATPase (proton pump) signature 448 466 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr4g4247 950 PRINTS H+-transporting ATPase (proton pump) signature 563 579 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr4g4247 950 PRINTS H+-transporting ATPase (proton pump) signature 591 607 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr4g4247 950 PRINTS H+-transporting ATPase (proton pump) signature 622 647 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr4g4247 950 PRINTS H+-transporting ATPase (proton pump) signature 763 784 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr4g4247 950 SUPERFAMILY HAD-like 325 645 IPR036412 -
Mtr4g4247 950 Gene3D - 899 950 - -
Mtr4g4247 950 Gene3D - 97 818 - -
Mtr4g4247 950 Gene3D - 329 628 IPR023214 -
Mtr4g4247 950 Pfam haloacid dehalogenase-like hydrolase 328 605 - -
Mtr4g4247 950 Gene3D - 135 219 - -
Mtr4g4247 950 SUPERFAMILY Calcium ATPase, transduction domain A 135 232 IPR008250 -
Mtr4g4247 950 MobiDBLite consensus disorder prediction 895 914 - -
Mtr4g4247 950 PANTHER CALCIUM-TRANSPORTING ATPASE 18 930 - -
Mtr4g4247 950 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 37 809 IPR006534 GO:0008553|GO:0016021|GO:0120029
Mtr4g4247 950 Pfam Cation transporter/ATPase, N-terminus 20 84 IPR004014 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr4g4247 Mtr-Chr4 56573094 56584714 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4247 18 950 Primary Pumps ATPases AT3G42640 83.708 0.0 1598
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4247 K01535 - gmx:100798717 1636.7
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4247 4 56573094 56584714 Mtr4g4247 4 56573094 56584714 ECH