Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4230 ATGGCGTTTGATCAAAATTCCGTTCCAAAAGATCTACGCGTATTGAACGTTGCTCCGATAATGATGGAGGAGCCACTCATTTCTCCGGCAAGCGTCACCTCGCCGCCGACTCCAGATTCAGTTTCCGATTATTTCTATCAACCGTCGGTCTCGTCCCCCGCAACGTCAGGAACCTGGTGCGTTCGTCCCATTGGATTAAACTATGGCTCTAGTTTTGGGAACCGTGTTGTTGCTGGGAATGTATTGAATTTAGGAAATTGGGTAGGGGGTGCAAATAGTAATAATCACAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAGTTTGCATAAGGTTGTTAATGATGGTGTAACTGTGAATGTAAATGGTTATACTTATGGTGGTAATGGTGGAACTAGGTCTGTTGACGAGACCAGCGATGATTCAAATTCGGGTAGGAAAGTTAAGTTTTTGTGTAGTTTTGGTGGGAAGATTTTGCCTAGGCCTAGTGATGGCGTGTTGAGATATGTTGGTGGACAAACAAGGATAATTAGTGTTAAGAAAAATGTGAGTTTTAATGATTTGGTGCAGAAAATGGTTGATACTTACGGACAACCTGTAGCTATTAAGTATCAGTTACCTGAGGAGGATCTCGATGCTTTGGTTTCGATTGCTTGTCCCGATGATGTTGAGAATATGATGGAGGAGTATGGGAAATTGGTCGAGAGATCTCCTGATGGTTCTGCTAAATTGAGGGTTTTTTTGTTTCCGTTTTCGGAGGTTGATGTTACCGGTGGAGAGCAGCTTGGGGATTTGCAGGATACGGGGCAGAAGTATTTTGATGCTGTGAATGGTCTTGTTGATGGGAATGGGGTGGTTTGTGGTGGGTTCAAGAGTAAGGAGAGTGTTACTAGTGCGGCTTCAACACAAAATTCTGATTTGAGTGGGATAGATTCTATTGATAGCCCAGTTGTCGGTCAAGGGGATTCAACGCCTTATGTTTTATCGCCTAGAGAGAATGTGGCGGGTTCTCCGGACACAAGTGCAGGTTTTTTGGTTTCTGAGTCTTGTACACCAGTTTACTCAGGTGCTTCGCCTGTTTCATTTGGCATGTCTGTGGCTAAGACTGGTCCAAATCACAATCCATATATTCATAATGAGGTTGAATTAGAAAAGTCTGTGCCTGTTGCTTTATCGCAGCAGCCATATGAGTTGCACCAATCTAGAATGGAAATCCCACCTCCCTCACCTTATCTGAACCACACAGAATCTAGAATGGAAATCCCACCTCCCTCACCTTATCCGAACCACACAGAATCTAGAATGGAAATCCCACCTCCCTCACCTTATCTGAACCACGCAGAGTATGTTCAGCTGCCTCCCCAGATGGGGTTCCCAAATCATCAGCTTTTAGGAAAGACGGGGCCTGTTTTCACCCAACAACAGTTTCATAATAATGCTTCCGGTTTAGCTTTCCATCAGGCCATCCCCGGAGCACAAATGACAATGACTCAACCTTCTTCTCGTCTTGGTATAAGATCAAACGTCATCCAGCCACAACCATTTATGCAACCGCAGCACAATCATCTGAACCAATATAGTGACGAAAATACATCAGGCATAAGGATTGTCCAGCTTCCTGCGGAACACAACTACAATACATATCAGGTTCCAGTGAATCAAGTTCCATCTATCATAGTTGGGGGTAATTGCAGCTGGGTTCAGGTTCCTCCACAAGAGCATGTTGTTTTCTCTGATGGGTTATTACCTCAACAGCAAGTTATTACCCCAGAGCAAATCCACAGAGCTGAGGGCTGTTCTATGTGTCAGAAAAAGCTGCCTCATGCCCATTCAGATCCAGTGGTTCAGGATCAACACGATGGCAGTTCGAGTCCAGTTAATGATTCAAGCCCAAGCTACAATAGTTTTCCGATGGAGGACAACATAAAAGCGCAAGCAACAATGAGGGTTGAGCCTATGGTGGCATCACCCTTAAAGGAAGGCGTTGTTGAACAAGGTTTTAGCGCAAGACCAGGTGCCATTAGCAAATTGGAAGCTCATAATGGAGTAAGACCTTCTACTGATAATACTGGGATTTCTAATAATTTTGAGCCTCAACATGAAGGTGGTAGGATTTTTATACAAAATCCAAAAGAATTTGATCATAGCATGAATTCATGTATCCAAGAAACGATTGGTAGGATAGGTGAAAAACATTCTTCTGGGGATGGGCTTGGGGCCATGGGAACAACACCACCATCATATCCAGGTGATGTTGGCCACCAGCATAAGGCACCGGGTGAAACCTGGGTTAAACAAGATGAGCTTGTGAATAAAGATGTCAATAATGATATACCTATAGTTGATGGAACGGCTATACATACTTCGGAGTGCATTGCTCAAGTATCTCCCAAAGAATACACTAATGAGCTTACTGGTGTTGTTTCTAAATCAGATGCAGTAGATAGTTGGATTAGACAGGGATATCTTAGATCTGTTGATGGAGGGAATGACACACTCAAGATTCACATGGCAGAAGGTTATGTAAGTAATGATCAATGCATGCTTCCAATTGATAAACCTTTAGAAGACAACACTCAGATTGCTGCAGAGGAAGAGGTGATTCTGGATAACAACTTTGGCACATCAAAATTGATAGTTGACGCAAATAAAATTAAGATGATAGGTGTGCAGCCATGTTCTTCTAAGGAAATTTCATCCAGGCACAGTTCCAGGACAGGGGAATACATTGATGTTGCACAACCACCTGTGTTGGACATTACTCAATCAAAGATCGTAAACCATCACAAGGATGATTCAACATCATCTACATCATCACCATCTTATATGTTTGGGGATATGCAGGATTCTCCAAACTCAGTTTTTGGCTATCAGGATCTTTGGAATATACAACAAGGAACCTACAAGAAATCAAATTTAGATGCACAATTGGATGGCAACCTCTACGAGTCATTCAAACAGAATTTAAATTTTGAAAATGGTTGGTGTGACAAAGGCTCAAACGAAGACCAACAACTTAAAGTTGTTGCTGAAGATGTAGCAGCTTCTGTTCTGCACCCATGTGCTCCTTCAAATCCTAGCTTGCAAGCCGGAGATGTTTCCCGTCATGAAAACATCGAGGAAGGTGATGTTCAAAATAATCTAATAGATGCGAAATGTAGAGATATAACTCAGGATGTCAAGAGCAACCCACCAGAAAAGGGTAACTTTGGCTTTCCGACATCTGGTGTCGGACGTCTGCAGATTATAAAGAACTGTGACCTTGAAGAGCTGACAGAATTGGGTTCTGGTACCTTTGGAACTGTTTATCATGGAAAATGGAGGGGAACTGATGTTGCAATCAAGCGAATAACTGATAGATGTTTTGCTGGAAAGCCTTCAGAGCAAGAGCGCATGAGAGATGACTTCTGGAATGAGGCAATCAAGCTTGCTGACTTGCACCATCCAAATGTGGTTGCTTTCTACGGTGTTGTACTTGATGGCCCAGGAGATTCTGTGGCAACAGTAACTGAGTATATGACTAATGGTTCTCTCCGGACTGCATTGCAAAAGAGTGAGAGGAATCTAGACAAGCGCAGACGTCTTTTGATTGCAATGGATGTGGCATTTGGAATGGAATACCTGCATGGAAAAAACATAGTACACTTTGACTTGAAAAGCGACAACTTGCTTGTGAATCTCCGAGATCCACACCGCCCAATATGCAAGGTTGGTGACTTGGGTCTATCCAAAGTAAAATGTCAGACACTGATCTCTGGAGGTGTGAGAGGAACTCTACCATGGATGGCTCCGGAATTGCTGAATGGAAGCAGTAGCCTTGTATCAGAGAAGGTTGATGTCTTTTCATTTGGTATTGTGATGTGGGAACTCTTAACTGGACAAGAGCCATACGCTGATTTGCACTATGGTGCTATTATAGGTGGTATTGTGAGCAACACTTTGCGCCCTCCAATTCCTCAATCTTGTGATCCAGAATGGAGTTTGCTGATGGAGAGATGTTGGTCCTCAGAGCCGTCAGAGAGACCCACCTTCACGGACATTGCTGATGAATTGCGTTCTATGTCAATGTCAACTAAACGCCAAAATCAACAGCTACAACCCTCTTCTTTGCACGCACAACTCAACAAATGA 4143 0.4277 MAFDQNSVPKDLRVLNVAPIMMEEPLISPASVTSPPTPDSVSDYFYQPSVSSPATSGTWCVRPIGLNYGSSFGNRVVAGNVLNLGNWVGGANSNNHNNNNNNNNNNNNNNNSLHKVVNDGVTVNVNGYTYGGNGGTRSVDETSDDSNSGRKVKFLCSFGGKILPRPSDGVLRYVGGQTRIISVKKNVSFNDLVQKMVDTYGQPVAIKYQLPEEDLDALVSIACPDDVENMMEEYGKLVERSPDGSAKLRVFLFPFSEVDVTGGEQLGDLQDTGQKYFDAVNGLVDGNGVVCGGFKSKESVTSAASTQNSDLSGIDSIDSPVVGQGDSTPYVLSPRENVAGSPDTSAGFLVSESCTPVYSGASPVSFGMSVAKTGPNHNPYIHNEVELEKSVPVALSQQPYELHQSRMEIPPPSPYLNHTESRMEIPPPSPYPNHTESRMEIPPPSPYLNHAEYVQLPPQMGFPNHQLLGKTGPVFTQQQFHNNASGLAFHQAIPGAQMTMTQPSSRLGIRSNVIQPQPFMQPQHNHLNQYSDENTSGIRIVQLPAEHNYNTYQVPVNQVPSIIVGGNCSWVQVPPQEHVVFSDGLLPQQQVITPEQIHRAEGCSMCQKKLPHAHSDPVVQDQHDGSSSPVNDSSPSYNSFPMEDNIKAQATMRVEPMVASPLKEGVVEQGFSARPGAISKLEAHNGVRPSTDNTGISNNFEPQHEGGRIFIQNPKEFDHSMNSCIQETIGRIGEKHSSGDGLGAMGTTPPSYPGDVGHQHKAPGETWVKQDELVNKDVNNDIPIVDGTAIHTSECIAQVSPKEYTNELTGVVSKSDAVDSWIRQGYLRSVDGGNDTLKIHMAEGYVSNDQCMLPIDKPLEDNTQIAAEEEVILDNNFGTSKLIVDANKIKMIGVQPCSSKEISSRHSSRTGEYIDVAQPPVLDITQSKIVNHHKDDSTSSTSSPSYMFGDMQDSPNSVFGYQDLWNIQQGTYKKSNLDAQLDGNLYESFKQNLNFENGWCDKGSNEDQQLKVVAEDVAASVLHPCAPSNPSLQAGDVSRHENIEEGDVQNNLIDAKCRDITQDVKSNPPEKGNFGFPTSGVGRLQIIKNCDLEELTELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRDDFWNEAIKLADLHHPNVVAFYGVVLDGPGDSVATVTEYMTNGSLRTALQKSERNLDKRRRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGQEPYADLHYGAIIGGIVSNTLRPPIPQSCDPEWSLLMERCWSSEPSERPTFTDIADELRSMSMSTKRQNQQLQPSSLHAQLNK* 1381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4230 1380 MobiDBLite consensus disorder prediction 1359 1380 - -
Mtr4g4230 1380 Pfam PB1 domain 171 254 IPR000270 GO:0005515
Mtr4g4230 1380 Gene3D Phosphorylase Kinase; domain 1 1086 1179 - -
Mtr4g4230 1380 Gene3D - 172 254 - -
Mtr4g4230 1380 MobiDBLite consensus disorder prediction 620 638 - -
Mtr4g4230 1380 SMART serkin_6 1092 1361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4230 1380 CDD PB1_UP2 155 253 - -
Mtr4g4230 1380 ProSitePatterns Protein kinases ATP-binding region signature. 1098 1129 IPR017441 GO:0005524
Mtr4g4230 1380 PRINTS Tyrosine kinase catalytic domain signature 1174 1187 IPR001245 GO:0004672|GO:0006468
Mtr4g4230 1380 PRINTS Tyrosine kinase catalytic domain signature 1211 1229 IPR001245 GO:0004672|GO:0006468
Mtr4g4230 1380 PRINTS Tyrosine kinase catalytic domain signature 1282 1304 IPR001245 GO:0004672|GO:0006468
Mtr4g4230 1380 PRINTS Tyrosine kinase catalytic domain signature 1326 1348 IPR001245 GO:0004672|GO:0006468
Mtr4g4230 1380 MobiDBLite consensus disorder prediction 612 638 - -
Mtr4g4230 1380 Pfam Protein tyrosine and serine/threonine kinase 1095 1355 IPR001245 GO:0004672|GO:0006468
Mtr4g4230 1380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1217 1229 IPR008271 GO:0004672|GO:0006468
Mtr4g4230 1380 SUPERFAMILY Protein kinase-like (PK-like) 1084 1353 IPR011009 -
Mtr4g4230 1380 MobiDBLite consensus disorder prediction 92 113 - -
Mtr4g4230 1380 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 115 938 - -
Mtr4g4230 1380 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 973 1362 - -
Mtr4g4230 1380 ProSiteProfiles Protein kinase domain profile. 1092 1360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4230 1380 Gene3D Transferase(Phosphotransferase) domain 1 1180 1380 - -
Mtr4g4230 1380 PANTHER SERINE-THREONINE PROTEIN KINASE 973 1362 - -
Mtr4g4230 1380 PANTHER SERINE-THREONINE PROTEIN KINASE 115 938 - -
Mtr4g4230 1380 SUPERFAMILY CAD & PB1 domains 167 259 - -
Mtr4g4230 1380 SMART PB1_new 166 255 IPR000270 GO:0005515
Mtr4g4230 1380 CDD STKc_MAP3K-like 1098 1355 - -
Mtr4g4230 1380 MobiDBLite consensus disorder prediction 305 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4230 Mtr-Chr4 56387333 56395571 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4230 65 651 MAP Kinase Kinase Kinase AT3G46920 35.619 6.06e-79 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Mtr4g4230 PK_Tyr_Ser-Thr 8.7e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4230 - - mtr:MTR_4g116520 2704.09