Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4223 ATGTGTGTGCAAGAGGATGAACAAGTTGATCAAGATAATAATAATATGGAGAAACTTGATAACAGAAGAATTTCATGGCCTTTGCATTGTGATCTTTTGCATGACCAGATGGATAATACAGAAAGAGACTCTTCTTTTAGAATTTCAAGTGACCAAATCAGTGCTCCTAATTCATTTCCTCTGGAAAGCATTTGTGAGGATACAGAGATTGCAGACAAAAAACAGAACCTGATAAATTTCGTCCCTACACTTCGGTCGGGGGAGTGGTCTGATATTGGAGGTCGCCCATACATGGAGGATACTCACATAAGCATTGAGGACTTGGCAAAGAAATTTGGTTACGATGCTGTTTGCGACGAAGCTATTTCCTTTTATGGTGTATTTGATGGACATGGAGGGAAGACTGCTGCGCAATTTGTTCGGGATCATCTTCCGAAGGTGATTGTTGAGGATGCTGACTTCCCTCTTGAACTCGAGAAGGTGGTCACAAGGTCATTTTTGGAGACGGATTCAGAGTTTGCAAAAACATGCTCTATTGAGTCTTCCCTATCTTCTGGTACAACTGCTTTGACTGCAATTATATTTGGAAGGTCTTTACTTGTAGCCAATGCTGGGGACTGCAGGGCTGTTTTGTCCCGAGCTGGAGGGGTAATAGAATTGTCCAAAGATCATAGGCCTTTATGCATGAAAGAAAGGATGAGGATCGAGTCGCTTGGCGGATTTATTGATGATGGTTACTTGAATGGACAGCTAGGTGTGACGCGGGCTCTAGGCAACTGGCATCTTGAAGGAATGAAGGAAGTGAGTGGAAGAAATGGACCATTAAGTGCTGAGCCAGAACTTAAATTGATGACATTGACAAAAGATGACGAGTTTTTGATAATTGGAAGCGATGGAATATGGGATGTTTTTCGTAGCCAAAACGCTGTAGATTTTGCTAGAAGGAGGCTTCAAGAGCACAATGATGTGAAACAATGTTGCAAGGAAATAATAGGTGAAGCAATAAAGCGAGGAGCAACAGATAATTTAACTGTTGTGATGGTATGTTTTCAATCAGAACCACCACCACCTTTGGTTGTTGAAAGGCCTAACAGAGTCAGGAGAAGCATATCTGCTGAGGGACTTCAGAATCTTAAATACCTGTTAGAAAGATAG 1155 0.4173 MCVQEDEQVDQDNNNMEKLDNRRISWPLHCDLLHDQMDNTERDSSFRISSDQISAPNSFPLESICEDTEIADKKQNLINFVPTLRSGEWSDIGGRPYMEDTHISIEDLAKKFGYDAVCDEAISFYGVFDGHGGKTAAQFVRDHLPKVIVEDADFPLELEKVVTRSFLETDSEFAKTCSIESSLSSGTTALTAIIFGRSLLVANAGDCRAVLSRAGGVIELSKDHRPLCMKERMRIESLGGFIDDGYLNGQLGVTRALGNWHLEGMKEVSGRNGPLSAEPELKLMTLTKDDEFLIIGSDGIWDVFRSQNAVDFARRRLQEHNDVKQCCKEIIGEAIKRGATDNLTVVMVCFQSEPPPPLVVERPNRVRRSISAEGLQNLKYLLER* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4223 384 ProSiteProfiles PPM-type phosphatase domain profile. 85 350 IPR001932 -
Mtr4g4223 384 SUPERFAMILY PP2C-like 77 351 IPR036457 -
Mtr4g4223 384 Gene3D - 67 354 IPR036457 -
Mtr4g4223 384 PANTHER PROTEIN PHOSPHATASE 2C 1 368 IPR015655 GO:0004722|GO:0006470
Mtr4g4223 384 SMART PP2C_4 75 348 IPR001932 -
Mtr4g4223 384 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 368 - -
Mtr4g4223 384 CDD PP2Cc 85 350 IPR001932 -
Mtr4g4223 384 Pfam Protein phosphatase 2C 97 342 IPR001932 -
Mtr4g4223 384 Coils Coil 2 22 - -
Mtr4g4223 384 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4223 Mtr-Chr4 56348404 56351378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4223 74 383 PP2C-type Phosphatase Gene Family AT2G25620 58.333 1.07e-128 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Mtr4g4223 PP2C 2e-66 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4223 K14803 - gmx:100782648 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4223 4 56348404 56351378 Mtr4g4223 4 56348404 56351378 ECH