Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr4g4209 | ATGTCTTCCGAGATCGAGGTCGTCGAGGAGGTTCAATCTCGCCGCGATCAACAATCGCCACCGTCATCATCATCATCATCTTCCGCCGTCGTCGACGAAGTCGCCAGCCGGAACGACGTGTACACTGCCGCGGCTTATGGGGATTTGGAGAAGCTACATAGATTGGTGGAGATTGAAGGTTGTCTTGTTAACGAGCCTGATGGTTTGGGTTACTACGCTCTTCAGTGGGCTGCTCTTAATAACCGCACTGCTGCTGCTCAGTACATTATTGAGCATGGTGGAGATGTAAATGCAACAGATCATTCTGGCCAGACAGCATTGCATTGGAGTGCGGTTCGGGGTGCTATTCAGGTTGCAGAGCTATTACTCCAAGAGGGTGCTCGAGTGAACGCTGCTGACATGAATGGGTATCAGATAACACATGTTGCTGCTCAATATGGTCAGACGGCTTTCCTTTACTATGTTATTTCAAAATGGAATGCTGACCCTGATGCTCCTGATAAAGATGGAAGATGCCCCTTGCATTGGGCTGCTTACAAAGGTTTTGCTGATTGTATACGTCTTCTGTTATTTCTTGATGCACATCGGGGGCGTCCGGATAAAGACGGTACCACTCCTCTCCATTGGGCTGCTATGCGAGGTAACTTGGAGGCCTGTACCGTGTTAGTACAGGCTGGCAAAAAGGAAGACCTGGTAGTGACTGATATTAGTGGCCTTACGCCAGCTCAACTTGCTTCTGATAGGAAACACAGACAAGTTGCTTTTTTCCTTGGAAATGCCCGAATGCTGCTTGATAAAAGCTTTGACTCTAACAGCCGCCTTGGAAAGATATCTAAATTAGGACTTGCTCCTGTACTTTGGTGCATAATTTTTGTGCTATTGGTCACCTATATTCATTCGGTCATCTTGGCAACAAATATGCCAAAGCTGACAGCATCAGCTGGCCTCTTTGCATGGTTTGGAGTGTTGCTTGCTACTGTTGGATTGGTGATGTTTTATAGGTGTAGCAGCAAGGATCCAGGTTATATCAGAACGAATGGGCATGACACTCAGAATATGAAAGATGATGAGCCTCTTTTGAAGATTGAGAAAAATAATCCTGCTTTGCTAGCTGGAAATTGGTCCCAACTTTGTGCAACATGCAAGATTGTCAGACCTCTTCGTGCAAAACATTGTTCTACATGTGATCGTTGTGTGGAGCAATTTGACCATCATTGTCCTTGGGTATCCAATTGCATTGGCAAGAAGAATAAATGGGATTTCTTTGCTTTTCTTATTCTTGAAGTTTCAGCAATGTTGGTTACTGGTGGAGTATGTCTTACAAGAGTACTAACTGATCCACTTGCTCCTTCTTCGTTTGGGGCATGGATTAATTATGCTGGTAAAAATCACATTGGTGCAATATCATTTCTAATTGCTGATTTTTTCCTCTTCTTCGGAGTGTTTGCTTTGACAGCTGTTCAGGCTAGTCAGATATCACGCAATATTACAACAAATGAAATGGCAAATGCATTGCGGTATAGCTACCTCAGAGGTCCAGGTGGTAGATTCAGAAACCCATATGATCATGGTATCAAGAAGAACTGTTCTGATTTTTTGATCAATGGGTACAATGAAGACTTGGAGTATGTTGAAGAATCAGGTAACTCTGAGGAGGGTCTAGGAATGATGCACATGGCAAGGGGCTCAACCATAACAAATGGAGACTCACATTCTCATTCTGATCATGCCAACGGAAACGGAAATGGCCATGTTGTTATTAATGTGGATTCAAACAGTACCAACTCAAAAACACATCATGGTCATAGTAATGGTCATGTTCATTCTTCACATTGTAGTCATAGTAACCAAGGTAAAACCAGAAATGACAGCATTCCTGTGGGCTTAGGTCTTGGCCTCGGACGGAACACCAGATCTGTTTCATCCTAG | 1929 | 0.4401 | MSSEIEVVEEVQSRRDQQSPPSSSSSSSAVVDEVASRNDVYTAAAYGDLEKLHRLVEIEGCLVNEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNATDHSGQTALHWSAVRGAIQVAELLLQEGARVNAADMNGYQITHVAAQYGQTAFLYYVISKWNADPDAPDKDGRCPLHWAAYKGFADCIRLLLFLDAHRGRPDKDGTTPLHWAAMRGNLEACTVLVQAGKKEDLVVTDISGLTPAQLASDRKHRQVAFFLGNARMLLDKSFDSNSRLGKISKLGLAPVLWCIIFVLLVTYIHSVILATNMPKLTASAGLFAWFGVLLATVGLVMFYRCSSKDPGYIRTNGHDTQNMKDDEPLLKIEKNNPALLAGNWSQLCATCKIVRPLRAKHCSTCDRCVEQFDHHCPWVSNCIGKKNKWDFFAFLILEVSAMLVTGGVCLTRVLTDPLAPSSFGAWINYAGKNHIGAISFLIADFFLFFGVFALTAVQASQISRNITTNEMANALRYSYLRGPGGRFRNPYDHGIKKNCSDFLINGYNEDLEYVEESGNSEEGLGMMHMARGSTITNGDSHSHSDHANGNGNGHVVINVDSNSTNSKTHHGHSNGHVHSSHCSHSNQGKTRNDSIPVGLGLGLGRNTRSVSS* | 643 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr4g4209 | 642 | ProSiteProfiles | Ankyrin repeat region circular profile. | 102 | 133 | - | - | |
Mtr4g4209 | 642 | SMART | ANK_2a | 202 | 233 | IPR002110 | GO:0005515 | |
Mtr4g4209 | 642 | SMART | ANK_2a | 69 | 98 | IPR002110 | GO:0005515 | |
Mtr4g4209 | 642 | SMART | ANK_2a | 102 | 131 | IPR002110 | GO:0005515 | |
Mtr4g4209 | 642 | SMART | ANK_2a | 237 | 266 | IPR002110 | GO:0005515 | |
Mtr4g4209 | 642 | SMART | ANK_2a | 135 | 165 | IPR002110 | GO:0005515 | |
Mtr4g4209 | 642 | SMART | ANK_2a | 169 | 201 | IPR002110 | GO:0005515 | |
Mtr4g4209 | 642 | SMART | ANK_2a | 35 | 65 | IPR002110 | GO:0005515 | |
Mtr4g4209 | 642 | MobiDBLite | consensus disorder prediction | 564 | 642 | - | - | |
Mtr4g4209 | 642 | MobiDBLite | consensus disorder prediction | 14 | 31 | - | - | |
Mtr4g4209 | 642 | Pfam | DHHC palmitoyltransferase | 376 | 503 | IPR001594 | GO:0016409 | |
Mtr4g4209 | 642 | MobiDBLite | consensus disorder prediction | 564 | 600 | - | - | |
Mtr4g4209 | 642 | ProSiteProfiles | Ankyrin repeat profile. | 169 | 201 | IPR002110 | GO:0005515 | |
Mtr4g4209 | 642 | PANTHER | - | 1 | 603 | - | - | |
Mtr4g4209 | 642 | PANTHER | PROTEIN S-ACYLTRANSFERASE 24 | 1 | 603 | - | - | |
Mtr4g4209 | 642 | Pfam | Ankyrin repeats (many copies) | 204 | 257 | IPR002110 | GO:0005515 | |
Mtr4g4209 | 642 | ProSiteProfiles | Ankyrin repeat region circular profile. | 202 | 226 | - | - | |
Mtr4g4209 | 642 | ProSiteProfiles | Ankyrin repeat profile. | 69 | 101 | IPR002110 | GO:0005515 | |
Mtr4g4209 | 642 | ProSiteProfiles | Ankyrin repeat profile. | 102 | 134 | IPR002110 | GO:0005515 | |
Mtr4g4209 | 642 | ProSiteProfiles | Ankyrin repeat region circular profile. | 169 | 190 | - | - | |
Mtr4g4209 | 642 | Pfam | Ankyrin repeats (3 copies) | 42 | 133 | IPR002110 | GO:0005515 | |
Mtr4g4209 | 642 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Mtr4g4209 | 642 | SUPERFAMILY | Ankyrin repeat | 38 | 258 | IPR036770 | - | |
Mtr4g4209 | 642 | MobiDBLite | consensus disorder prediction | 608 | 623 | - | - | |
Mtr4g4209 | 642 | Gene3D | - | 7 | 272 | IPR036770 | - | |
Mtr4g4209 | 642 | ProSiteProfiles | Ankyrin repeat profile. | 202 | 234 | IPR002110 | GO:0005515 | |
Mtr4g4209 | 642 | ProSiteProfiles | DHHC domain profile. | 376 | 426 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr4g4209 | Mtr-Chr4 | 56152748 | 56160583 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr4g4209 | 43 | 222 | Ion Channels | AT2G25600 | 32.044 | 3.99e-11 | 64.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr4g4209 | K20032 | - | gmx:100788923 | 1071.23 |