Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4200 ATGTATTTGGGAGATGGGGACATCGTGGCAGTGCTACAACAGCTGGTAGAATTTTATCGTTGGCATTGGTTCAGAAAATTCTCGCTGGAGGGAGAAGTCTGTTTCATGCTGACTACATTGCTCCACCCATTCAGGCTCTTTCAAAATGGCTTATGTTGCTTGGATTTTGTATTGTTTTGTTTCTTATCCAATTTGTGGACCGCATGCTTCTTTGATTGGGGTGTCAAATTTAAGAAGGTTAAGCCAAGGATTAACATGGATCCATTCAAGGTTGATGATGTTGAAGGATCTGTATGCATTTATCCAATGGTTTTGGTTCAAATTCCAATGTGCAATGAGAAAGAGGTGTATGCACAGGCAATTTATGCAGTCTGTCAAATTGATTATCCATGTGATCTTTTACTAATTCAAGTACTTGAGGGTTCTGAAGATGAGATCATAGAATGGTTAATTAAGGTCGAGGTCTCTAAGTGGAATTTAAAGGCAGTCAACATAATCTATCGGCATCGCTTGGCCAGGACCGGATATAAAGCTGGAAAACTGAATTGTGCAATGAGCTGTGACTATGTAAAAAACTATGTATTTTTTGCAATATTTGATACACACTTTAAGTTATCATATAAGGTTTAA 630 0.3794 MYLGDGDIVAVLQQLVEFYRWHWFRKFSLEGEVCFMLTTLLHPFRLFQNGLCCLDFVLFCFLSNLWTACFFDWGVKFKKVKPRINMDPFKVDDVEGSVCIYPMVLVQIPMCNEKEVYAQAIYAVCQIDYPCDLLLIQVLEGSEDEIIEWLIKVEVSKWNLKAVNIIYRHRLARTGYKAGKLNCAMSCDYVKNYVFFAIFDTHFKLSYKV* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4200 209 PANTHER - 68 204 - -
Mtr4g4200 209 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 98 206 IPR029044 -
Mtr4g4200 209 PANTHER GLYCOSYLTRANSFERASE-RELATED 68 204 - -
Mtr4g4200 209 SUPERFAMILY Nucleotide-diphospho-sugar transferases 102 188 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4200 Mtr-Chr4 56081208 56085978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4200 14 204 REM Transcription Factor Family AT2G24630 50.718 5.39e-55 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4200 - - mtr:MTR_4g116020 213.772