Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4188 ATGGAAGATGTAATAAAAAATGAACGGCTCGAAACATATTTTCTGGGTATGTGGGTGCGTTCATTAGAGAGTGAACTCAGGAATGCAGATCCAAGGTCACGTCGTTTTGAGCGTATCAGAAAGAGTCTCGCATCATCACAAGAAGTTATGCTTTTCTGCTGGCGTCAAATTGACCACTTCATCAACATGCGGAATTATGTCATTGTGCAAGCTGTGCTCCGTAATCATCCATTACCAGTTTTAGACCATGCCCCGATCAGGATGACAGAACTTGCATATGCTGTGACTATAGCGCCTGAAAGTGAAACCAGCAGGGAGGAATTTGTTAAGAAAAAACGAATCACCGGCGAGGAAATGTTTCTGCCACCTCCTGAAATAGCAATTGGAATTGATATTGGCACAGGGCCACGTTGTGTTGCTGTGTGGAATGATTCCAAAGTGGAACTTTTTAGCAATACAGAAAATGAGAACATTATGAAATCAGCTGAAATTATCAAAGATGATGGCTCTTCTATTGGAGTTATTAGTGCTAGTGAAGTGACACTCTCCCAAAACCAGGAGCATGACATGTTGTATGAAGCAACAATTTACAACATGAGACGTTTGATTGGCAGAATTGATGTTGACCCGATAGTTCAAGAAAATAAAAAATTTCCATTTTTGCTGCATACTTTGTACATTGGCGGTTGCCCTTTTATTGCTGCACCAAAGAACATAGCTTTGAAGTTTACCGCTGCTGAACAAGTCCTTGTAGTATATCTGGGTCAATTAAGAGTACTGGCTGAAACTCAACTGGAACGACCTGTAAGCAAGGTAGTGTTGATGGTTCCAGTTTCATTCAGTCGAATCCAGCTAGCCCGGACACAATACGTTTGTGCAAAGGCCGGTCTTTATGATCTCAAGCTGATGCCTCAACCAACAGCAGTGGCTTTGTTGTATGCACAGCAACAAATGCTGGCTTCTTTTTCTTGTGAGGATATGGACAGCGAAAGCAATAAAGTAGCTCTCATTTTCAATATGGATTTCGGTTATTGTGATGTTGCTGTGACTGTTGCTACAGCAGAAGGAGAATGCAGAATGAAAGCTTTGGCAGGAAGTTCTATTGGTGGAGAAGACTTGCTTGTGAATATGATACGTTATCTCTTACCAGATTCTGAAAATATATTCAAGAAGCATATTGATGGGGACGAGGAAAATAAATCAATGAGTTTGCTTCGAGTGGCAATTCTAGAAGCGATTCAACGACTTTCCTCTCAGACAAGTGTTGAGTTTGATTTAGACTTGGGAGATGGTTTGAAAATATGTAAGGTTGTAAAGAGGGAGGAGTTTGAGGATGTAAATAAAGAGGTGTTTGAAAAGTGTGAAAGGCTGATCATCCAAAGCTTGCAAGATGCAGATATAAAAGTTGATGATATAAATGATGTGATAATTGTTGGTGGATGTTGGAATATACCGAAGGTGAAGGATCTTGTTACTAAAATATGCAAAGGAAAGGAACTTTATAAAGGAATGAACCCTTTGGAAGCTGCACTTTGTGGTGCAGCTGTGGCAGGAGCTGTTGCTGCAGGAATTGTTGATCCCAAGTTAGGCTTGATGACTTCTCATGTCACACCTTTTTCTGTTGGAATTCAGGCTAATGGGATCCACTTTGTCCCTGTAATTCCGAGGAACACATCGATGCCAACAACGAGGGTTATGGATTTCACAACTATTCATGATAATCAAACTGAGGCATTGATCCTTGTCTACGAAGGTGAGGGACAGAAGGCTGAAGAAAACCACCTTTTGGGATATTTGAAAATAATGGGAATACCTGCAGCACCAAGAGGAGTTCCAGAAATTAATGTGCGTATGAACATAGACTGTGAAAACGGGCTGAGAGTTGGAGCTGCTGTTTATATGCCTGGATCAGACCAACCTGCAATTCCTGCTATGGAAGCGAGGATGCCTATGTCAATGACCGATGATGGGTATGCCGAGGCACTAAATAGAACCTATGGTGACACAAAGGATTTGGTTACTCTCGTCAAGATGGAATAG 2040 0.4142 MEDVIKNERLETYFLGMWVRSLESELRNADPRSRRFERIRKSLASSQEVMLFCWRQIDHFINMRNYVIVQAVLRNHPLPVLDHAPIRMTELAYAVTIAPESETSREEFVKKKRITGEEMFLPPPEIAIGIDIGTGPRCVAVWNDSKVELFSNTENENIMKSAEIIKDDGSSIGVISASEVTLSQNQEHDMLYEATIYNMRRLIGRIDVDPIVQENKKFPFLLHTLYIGGCPFIAAPKNIALKFTAAEQVLVVYLGQLRVLAETQLERPVSKVVLMVPVSFSRIQLARTQYVCAKAGLYDLKLMPQPTAVALLYAQQQMLASFSCEDMDSESNKVALIFNMDFGYCDVAVTVATAEGECRMKALAGSSIGGEDLLVNMIRYLLPDSENIFKKHIDGDEENKSMSLLRVAILEAIQRLSSQTSVEFDLDLGDGLKICKVVKREEFEDVNKEVFEKCERLIIQSLQDADIKVDDINDVIIVGGCWNIPKVKDLVTKICKGKELYKGMNPLEAALCGAAVAGAVAAGIVDPKLGLMTSHVTPFSVGIQANGIHFVPVIPRNTSMPTTRVMDFTTIHDNQTEALILVYEGEGQKAEENHLLGYLKIMGIPAAPRGVPEINVRMNIDCENGLRVGAAVYMPGSDQPAIPAMEARMPMSMTDDGYAEALNRTYGDTKDLVTLVKME* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4188 679 Gene3D - 128 518 - -
Mtr4g4188 679 Gene3D Actin; Chain A, domain 4 369 453 - -
Mtr4g4188 679 SUPERFAMILY Actin-like ATPase domain 333 520 IPR043129 -
Mtr4g4188 679 Gene3D - 318 501 - -
Mtr4g4188 679 CDD HSP70_NBD 128 509 - -
Mtr4g4188 679 Gene3D - 197 252 - -
Mtr4g4188 679 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 116 678 - -
Mtr4g4188 679 PANTHER HEAT SHOCK PROTEIN 70KDA 116 678 IPR013126 GO:0005524|GO:0140662
Mtr4g4188 679 Pfam Hsp70 protein 127 632 IPR013126 GO:0005524|GO:0140662
Mtr4g4188 679 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 536 638 IPR029047 -
Mtr4g4188 679 SUPERFAMILY Actin-like ATPase domain 126 314 IPR043129 -
Mtr4g4188 679 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 529 649 IPR029047 -
Mtr4g4188 679 PRINTS 70kDa heat shock protein signature 126 139 - -
Mtr4g4188 679 PRINTS 70kDa heat shock protein signature 472 488 - -
Mtr4g4188 679 PRINTS 70kDa heat shock protein signature 504 524 - -
Mtr4g4188 679 PRINTS 70kDa heat shock protein signature 530 549 - -
Mtr4g4188 679 PRINTS 70kDa heat shock protein signature 611 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4188 Mtr-Chr4 55961797 55964014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4188 127 630 Calmodulin-binding Proteins AT3G12580 34.578 6.33e-78 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4188 K09489 - gmx:100809773 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4188 4 55961797 55964014 Mtr4g4188 4 55961797 55964014 ECH