Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4180 ATGGATGTTACTGTTGTGTTCTTGGTGCTGTTGCTGCAATTGTCAACAATTTTTGGGTCTGAAGTTGTGTTACAGACAAAGGGTTGTGGTGATAATTTGGTAGCAAATTCATATTCTAGTCATGGTGAGGAATTGTTCTACATAAATGGAAATGTGGTAAACAGAGTTGATTTCTGTAAAGCTCTCCAATTGTATATTGCAAATGGTTGTGATTTGAAGGATTACTTTGGAAGTAACAATTGTGTGTTGGATTTGAATGTCTCTTTTGTGAATTTGCCTTCAACAGCAGGAAGGAAACTTTTGCAGAAAGATTTGAACAATAATTCGACGTCACAAGGAGATCCTAAGCAAGTGTCAAGCAGCCAAGTTGGAATTTTTGCGGGTGGAGCTTTGTTGGTATGTTGTGCTGTTGTTTGTCCTTGTTTCTATGGGAAGAGAAGAAAGGCAACTTCTCATGCTGTTCTGGAAAAGGACCCGAATTCAATGGAATTAGGTTCCTCCTTTGAACCATCAGTTTCTGATAAGATCCCGGCTAGTCCACTTCGGGTGCCACCTAGTCCATCAAGATTCTCAATGTCTCCAAAACTCAGCAGACTTCAGTCATTACATCTCAACCTGAGTCAGGTTTCTAAAGCTACCCGTAATTTTTCAGAAACATTACAAATAGGAGAAGGAGGTTTTGGAACTGTCTACAAGGCTCATTTAGATGATGGCCTGGTTGTGGCTGTAAAACGCGCAAAAAGGGAACATTTTGAGAGTCTGAGAACAGAATTCAGCAGTGAAGTTGAACTTCTGGCCAAAATTGATCACCGAAACCTTGTGAAGCTACTTGGCTATATTGACAAAGGAAACGAACGTATCCTTATTACGGAGTTTGTGGCAAATGGTACTCTTCGAGAACATTTGGATGGTTTGCGTGGAAAAATTCTGGATTTCAATCAGCGCCTTGAAATTGCAATCGATGTTGCACATGGATTGACCTATCTGCATCTGTATGCAGAAAAACAAATTATCCATCGAGATGTGAAATCATCCAACATTCTTCTGACTGAAAGCATGCGAGCTAAAGTCGCTGATTTTGGATTTGCTAAGCTTGGTCCTGTAAACAACGACCATACACACATTTCTACCAAAGTGAAGGGAACAGTCGGCTATTTGGACCCTGAGTATATGAAAACATACCATCTCACTCCAAAAAGTGATGTTTACTCATTTGGAATTTTGCTTTTAGAAATTCTGACGGGCCGTCGCCCTGTGGAGCTGAAAAAAAGTGCTGAAGAGCGAGTTACATTAAGATGGGCCTTCAGGAAATATAATGAAGGAAGTGTGGTGGCACTGCTTGATCCTTTAATGCAAGAAGCTGTAAAAACTGATGTTGCTGTGAAGATGTTTGATTTGGCATTTAATTGTGCAGCACCGGTAAGATCAGATAGACCTGACATGAAAACAGTGGGTGAGCAATTATGGGCAATAAGGGCAGATTACCTCAAGAGTAGTAGCACAACTGCAAGGAGAGAATGA 1521 0.4063 MDVTVVFLVLLLQLSTIFGSEVVLQTKGCGDNLVANSYSSHGEELFYINGNVVNRVDFCKALQLYIANGCDLKDYFGSNNCVLDLNVSFVNLPSTAGRKLLQKDLNNNSTSQGDPKQVSSSQVGIFAGGALLVCCAVVCPCFYGKRRKATSHAVLEKDPNSMELGSSFEPSVSDKIPASPLRVPPSPSRFSMSPKLSRLQSLHLNLSQVSKATRNFSETLQIGEGGFGTVYKAHLDDGLVVAVKRAKREHFESLRTEFSSEVELLAKIDHRNLVKLLGYIDKGNERILITEFVANGTLREHLDGLRGKILDFNQRLEIAIDVAHGLTYLHLYAEKQIIHRDVKSSNILLTESMRAKVADFGFAKLGPVNNDHTHISTKVKGTVGYLDPEYMKTYHLTPKSDVYSFGILLLEILTGRRPVELKKSAEERVTLRWAFRKYNEGSVVALLDPLMQEAVKTDVAVKMFDLAFNCAAPVRSDRPDMKTVGEQLWAIRADYLKSSSTTARRE* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4180 506 PANTHER OS07G0166700 PROTEIN 13 495 IPR045272 GO:0004714|GO:0006468
Mtr4g4180 506 Gene3D Transferase(Phosphotransferase) domain 1 293 504 - -
Mtr4g4180 506 Gene3D Phosphorylase Kinase; domain 1 187 292 - -
Mtr4g4180 506 Pfam Protein tyrosine and serine/threonine kinase 221 488 IPR001245 GO:0004672|GO:0006468
Mtr4g4180 506 SUPERFAMILY Protein kinase-like (PK-like) 197 491 IPR011009 -
Mtr4g4180 506 ProSitePatterns Protein kinases ATP-binding region signature. 222 244 IPR017441 GO:0005524
Mtr4g4180 506 CDD STKc_IRAK 222 488 - -
Mtr4g4180 506 SMART serkin_6 216 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4180 506 ProSiteProfiles Protein kinase domain profile. 216 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4180 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 337 349 IPR008271 GO:0004672|GO:0006468
Mtr4g4180 506 PANTHER NODULATION RECEPTOR KINASE-LIKE PROTEIN 13 495 - -
Mtr4g4180 506 MobiDBLite consensus disorder prediction 166 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4180 Mtr-Chr4 55891334 55897045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4180 201 491 Receptor kinase-like Gene Family AT5G59700 46.575 1.96e-72 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Mtr4g4180 PK_Tyr_Ser-Thr 5.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4180 - - aprc:113845864 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4180 4 55891334 55897045 Mtr4g4180 4 55891334 55897045 ECH