Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4158 ATGGAGCTTCATTTGGGTCTTGCTCTCTCCACTTATAATAATTCTCATGCCTACAATATTTCATCTACCAAGAATCACTTCCCTTTGAACCATGACAATAAGAAACGAAGATTTTCTCAACTCTTGGAGCATGCAGCAGAAACAACCAACCTTCCCACTCTTTCTCTTCTACCATTAACTCCTGGCCACTCAGATGATCATGATCATGATGATCAACACTGCTCTCACAGCTCCACTACCACTATCACCAAGAGCAATGAAGATGATGAAGAAGCTCTTGTTGGATGGCCTCCGGTTAATTGTAGGAGGAAGAAACTTCGTTGTAATGAAAATGATGTTGAGGATCACGTGGTCCCTATTGATGGTTCTCATAATCATAGGAATTACGTGAAGGTGAAGATGGAAGGTGTAGGAATAGCTCGAAAGGTTAATCTTGGCATGCACCATTCATTTCATACTCTCAATCAAACTTTAATGGACATGTTTGAAAAATGTGATCATGATCAACAACAGTATGAACTGGTTTATCAAGACAAAGAAGGTGATTGGCTTCTTGCTCAAGATATTTCATGGAGAAGTTTCATTGAGTGTGCGCAACGCCTCAAATTGCTTAAGAGCAGGGGATAG 627 0.4035 MELHLGLALSTYNNSHAYNISSTKNHFPLNHDNKKRRFSQLLEHAAETTNLPTLSLLPLTPGHSDDHDHDDQHCSHSSTTTITKSNEDDEEALVGWPPVNCRRKKLRCNENDVEDHVVPIDGSHNHRNYVKVKMEGVGIARKVNLGMHHSFHTLNQTLMDMFEKCDHDQQQYELVYQDKEGDWLLAQDISWRSFIECAQRLKLLKSRG* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4158 208 Gene3D - 122 208 - -
Mtr4g4158 208 PANTHER AUXIN-RESPONSIVE PROTEIN IAA20 1 206 - -
Mtr4g4158 208 Pfam AUX/IAA family 22 166 IPR033389 -
Mtr4g4158 208 Pfam AUX/IAA family 169 206 IPR033389 -
Mtr4g4158 208 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 206 IPR003311 GO:0005634|GO:0006355
Mtr4g4158 208 SUPERFAMILY CAD & PB1 domains 124 203 - -
Mtr4g4158 208 MobiDBLite consensus disorder prediction 60 89 - -
Mtr4g4158 208 ProSiteProfiles PB1 domain profile. 127 208 IPR000270 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4158 108 206 B3 DNA Binding Superfamily AT3G61830 27.358 5.75e-09 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mtr4g4158 AUX_IAA 5.8e-18 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4158 K14484 - gmx:100808466 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4158 4 55578949 55580909 Mtr4g4158 4 55578949 55580909 ECH