Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4130 ATGGTCATGGATGCCTCCTATACTGCAACTTTCACCTTCCTTCTGTTCATGTTCTTACCATTATCTAATACTGGAGCTCAAACACAATCACAACTATTAGAGCGGATAGCACCGGGTTCCTCACTTTCCCCCGGTAGCAGTGATTACAAATCTATGTGGTTTTCTCCTTCTGGCCAATTCGCTTTTGGCTTTTATTCACAAGGCAACAATGGCTTTGCTATTGGAATTTGGTTGGTTGGCAAGAATAAGATGAACAACACAATAGTATGGACTGCAAACCGTGATGACCCTCCAGTAACCTCAACTGTAAAGCTACAATTTACCATGAAGGGTACAATAATACTAACAGATCAACAGGGACAACAGAAGCTTATTGTTAATGCTAATACAAGAGCTTCCTCGGCCTCCATGCTTGATTCTGGGAACTTTGTACTATATGACAACCATAATATTTCCAGCATCATATGGCAGAGTTTCGATCACCCGACTGATACTTTATTGGAGAGTCAATCTCTGCCTTGTGGAGGCCAACTGTCCTCTAGTTTATCAGAGACCAATCACTCAACCGGAAGGTTTCAACTCAACATGCAGGTTGATGGAAATCTTGTTCTGTACCCAGCATACACAACAAAAACAGGTTGGGATTCTTATTGGACCTCTGATACTGTTAGTGCCAATGTCAAACATCATCTTTACCTTAACAGTACAGGTTTACTGCAGATCTGGAATGACAGCAGTGATTCTAGCCGTATTACCACTTTGCGTAATACTGAAGAAGACCAACAGAACACTGGAAACCAGACTATTTATCGTGCAACTCTTGATTTTGATGGGGTTTTTAGGCTGTATGCTTATCATGTTAACAATGGAAGTAACATTATTATGGGAAGTTGGCCAGGGAAGAATCCATGCTATGTAAAGGGGTTTTGTGGCTACAACAGTTTCTGCACATTCGATGACGACAAACCAGTATGCAATTGTCTCCCGGGTTATAAACTTATAGATGCAAATGAAGATACTCTTGGCTGTGAAAGGAACTATTCAACATCAGAGTGTAGAGGTGACAAATATGGTGTGGCCTTTTATAACATGGTCCCAATGACCAATCTTGTTTGGAATGACCATCCTTATTTCAAAGATGATGATATGTCATCAGAAGAAGAATGCTTATTTGCTTGTTTGATTGATTGCAATTGTTGGGCTGCAATTTATGAAGAAGGAAGATGCAAGAAACAAGGACTTCCTTTGAGATATGTCAAACGAACACATGAAGCTGACGATTTTACCACTGCTTTCTTAAAGGTTGGAAACAACAGCATCCAAAGCTCAAAGGGGTATGAAAGACCTTTTGCTTATCCAATCAAGACTACAAGTAACAAAGCAATAGTGCATATTATTGTTGTTACCTCCTTGTTTAGCATCATGTCGTGTTCAACGATCGTTATATCCATCCATTACATGTACAAAATTCGGGTATTAAAGTATAAAAGGCTAACAGAAACTGTTAACTTTGGAGGGCAGAATGCAGATTTGGCTTTGAGAAGGTTTACATACAATGAGCTGAGAAGAGCAACAAATAATTTCAAGGAAGAGTTGGGTAAGGGTGCTTTTGGAAAAGTTTACAAAGGAGCCTTAAACAAAGGTAAGAGATTGATTGCAGTGAAGAGACTAGAGAAGGTGGTGGAAGATGGGGAAAGGGAATTTCAAGCAGAAGTGAGATCCATTGGGAAAACCCACCACAGGAACCTAGTTAGATTGCTGGGTTTTTGTCATGAGGGTTCAAAAAGGCTTTTGGTTTATGAATACATGAGCAACGGATCACTTGAAAAGCTTCTGTTTGGTGATCAAAGACGTCCAGATTGGGATGAGAGAGTAAGAATGGCACTGGACATTGCTAGAGGGATCTCGTATCTCCATGAAGAATGTGAGGCACCAATCATTCATTGTGACATAAAGCCTCAAAACATTTTGATGGATGAGTTTTGGACTGCCAAGATATCCGATTTTGGTCTTGCAAAACTTTTAATGCCGGACCAAACCAGAACTTTCACGGTTGTTAGAGGGACACGGGGCTACATGGCTCCAGAATGGAACATGAACGTGCCAATATCACTTAAGGCAGATGTTTATAGCTATGGAATAATGTTGTTTGAAATTTTATGTTGCAGAAGAAACCTAGATGTTAATGTGTTGGAACCTGAGGAGATTCTTCTCTCTGGTTGGGCTTATAAGTGCCTTGTTGCGGGACAGGTGAATAATCTTGTTCCTTGGGAAGTCATTGATAATAATGTCATGGAAAATATGGTTAAAGTGGCACTTTGGTGTATCCAAGATGACCCTTTTCTCAGGCCAACGATGAAGGGTGTGGTGTTGATGTTAGAAGGAGTTACTGATATAGCAATTCCTCCTTGTCCAGATTCCGGTTATGCATAA 2433 0.4036 MVMDASYTATFTFLLFMFLPLSNTGAQTQSQLLERIAPGSSLSPGSSDYKSMWFSPSGQFAFGFYSQGNNGFAIGIWLVGKNKMNNTIVWTANRDDPPVTSTVKLQFTMKGTIILTDQQGQQKLIVNANTRASSASMLDSGNFVLYDNHNISSIIWQSFDHPTDTLLESQSLPCGGQLSSSLSETNHSTGRFQLNMQVDGNLVLYPAYTTKTGWDSYWTSDTVSANVKHHLYLNSTGLLQIWNDSSDSSRITTLRNTEEDQQNTGNQTIYRATLDFDGVFRLYAYHVNNGSNIIMGSWPGKNPCYVKGFCGYNSFCTFDDDKPVCNCLPGYKLIDANEDTLGCERNYSTSECRGDKYGVAFYNMVPMTNLVWNDHPYFKDDDMSSEEECLFACLIDCNCWAAIYEEGRCKKQGLPLRYVKRTHEADDFTTAFLKVGNNSIQSSKGYERPFAYPIKTTSNKAIVHIIVVTSLFSIMSCSTIVISIHYMYKIRVLKYKRLTETVNFGGQNADLALRRFTYNELRRATNNFKEELGKGAFGKVYKGALNKGKRLIAVKRLEKVVEDGEREFQAEVRSIGKTHHRNLVRLLGFCHEGSKRLLVYEYMSNGSLEKLLFGDQRRPDWDERVRMALDIARGISYLHEECEAPIIHCDIKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTVVRGTRGYMAPEWNMNVPISLKADVYSYGIMLFEILCCRRNLDVNVLEPEEILLSGWAYKCLVAGQVNNLVPWEVIDNNVMENMVKVALWCIQDDPFLRPTMKGVVLMLEGVTDIAIPPCPDSGYA* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4130 810 Gene3D Phosphorylase Kinase; domain 1 490 602 - -
Mtr4g4130 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 187 246 IPR036426 -
Mtr4g4130 810 Pfam D-mannose binding lectin 87 172 IPR001480 -
Mtr4g4130 810 SMART blect_4 33 162 IPR001480 -
Mtr4g4130 810 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1 29 807 - -
Mtr4g4130 810 SUPERFAMILY Protein kinase-like (PK-like) 512 794 IPR011009 -
Mtr4g4130 810 Gene3D Transferase(Phosphotransferase) domain 1 603 800 - -
Mtr4g4130 810 CDD STKc_IRAK 532 795 - -
Mtr4g4130 810 ProSiteProfiles Protein kinase domain profile. 526 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4130 810 PIRSF SRK 3 810 IPR024171 GO:0004674
Mtr4g4130 810 Pfam Protein kinase domain 528 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4130 810 Gene3D - 30 161 IPR036426 -
Mtr4g4130 810 PANTHER RUST RESISTANCE KINASE LR10-RELATED 29 807 IPR045874 GO:0004672
Mtr4g4130 810 Gene3D - 163 295 IPR036426 -
Mtr4g4130 810 SMART serkin_6 526 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4130 810 ProSitePatterns Protein kinases ATP-binding region signature. 532 555 IPR017441 GO:0005524
Mtr4g4130 810 ProSiteProfiles Bulb-type lectin domain profile. 39 158 IPR001480 -
Mtr4g4130 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 205 IPR036426 -
Mtr4g4130 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Mtr4g4130 810 CDD B_lectin 55 162 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4130 Mtr-Chr4 55185696 55188716 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4130 462 799 Receptor kinase-like Gene Family AT1G56120 41.108 6.74e-66 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr4g4130 Pkinase 1.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4130 - - ahf:112707609 967.607