Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4129 ATGGTCATGGATGCCTCCTATACTACAACTTTCACCTTCCTTCTGTTTATGTCCTTACCATTATCAAATGTTGGAGCTCAAACACAATCACAACTACTGGCGCGGATAGCACCGGGTTCCTCACTTTCCCCCGGTAGCAGTGATTACAAATCTATGTGGCTTTCTCCTTCTGGCCAATTCGCTTTTGGCTTTTATTCACAAGGCAACAATGGCTTTGCTATTGGAATTTGGTTGGTTGGCAAGAATAAGATGAACAGCACAATAGTATGGACTGCAAACCGTGATGACCCTCCAGTAACCTCAACTGTAAAGCTACAATTTACCATGAAGGGTACAATAATACTAACAGATCAACAGGGACAACAGAAGCTTATTGTTAATGCTAATACAAGAGCTTCCTCGGCCTCCATGCTTGATTCTGGGAACTTTGTACTATATGACAACAATAATATTTCCAGCATCATATGGCAGAGTTTCGATCACCCAACTGATACTCTATTGGAGAGTCAATCTCTACCTTGTGGAGGCAAACTGTCCTCTAGTTTATCAGAGACCAATCACTCAACCGGAAGGTTTCAACTCAACATGCAGGTTGATGGAAATCTTGTTCTGTATCCAGCATACATAGCTGAAACAAGTTGGGATGCTTATTGGGCCTCTGATACTGTTAGTGCCAATGTCAAACATCATCTTTACCTTAAAAGTACAGGTTTACTTCAGATCTTGGATGACAGCAGTGATTCTAGCCTTATTAAAATTTTGAATGATGCTGACGAGGACCAGCAAGAGACTGGCGGAAACCAGACTATTTATCGTGCAACCCTTGATTTTGATGGGGTTTTTCGGCTGCATGCTCGTCATGTTAACAATGGCAGTGACAAAATTATCGCAAGTTTTCCGGGGAATAACCCCTGTGAAGTAAAGGGGTTTTGTAGCTTAAACAGTTACTGCACATTCAAGGATGATAAACCATTATGCAACTGTCTCACGGGTTATAAATTTATAGATGCAAATGAAAAGACTCTCGGCTGCGAAAGGAACTATTCGAAAGCAGAGTGTAGAGCTGAGAAAGATGGTTTGGCCTTTTATGATATGGTCCCAATGAACAATATTGTATGGAAAGACCATCCTTATTTTGAGACTGAGGATATATTATCGGAAAAAGAATGCTCATTTGCTTGTTTGGTTGATTGCAACTGTTGGGCTGCACTGTATGAGGAAGAAAGATGCAAGAAACAAGGGTTGCCTTTGAGATATGTCACAAGGACACATGAAGCCGACGACTCGCCTGCAGCAGCATACATAAAGGTGGGAAATGGCAGCATCGAAAACTGGAAGGGGAATGATACACTTTTTTATCCACAGCCACCTCTAATTACAAGTACCAAAGCAGTGGTGCATATTATCATTGTTACATCAATTTTTACTGCGCTTTTGTGTTCAGCGATTTTAATATCCATCCATTACGTTTACAAGATTCGGGTATTAAGGTACAAAAGGCTAACGGACACTGGGAACCTAGGGTTGAATGAAGAGGTGACTCTGAGAAGGTTTTCATATAACGAGCTGAAAAGAGCAACAAATCATTTTAAGGAAGAGTTGGGTAAGGGTGCTTTTGGATCAGTTTACAAAGGGGCCTTAAACAAAGGTAAGAGATTGATTGCAGTGAAGAGACTAGAAAAAGTGGTGGAAGAAGGTGAAAAGGAATTTCAAGCAGAAGTGAGATCCATTGGGAAAACCCACCACAGGAACCTAGTTAGATTGCTTGGTTTTTGTGTTGAGGGTTCAAAAAGGCTTCTGGTTTATGAATACATGAGCAACGGATCACTTGGAAAGCTTCTTTTTGGTGATCAAAGACGCCCAGATTGGAATGAGAGAGTAAGAATAGCACTGGATATTGCTAGAGGGATCTTGTATCTCCATGAAGAGTGTGATGCTCCAATCATTCATTGCGACTTAAAGCCTCAAAACATTTTGATGGATAAGTTTTGGACTGCCAAGATATCTGATTTTGGGCTTGCAAAACTTTTAATGCCAGACCAAACCAGAACATTCACGATGGTCAGAGGGACAAGAGGGTACATGGCCCCGGAGTGGAACAAGAACGTGGCAATATCAGTGAAAACAGATGTTTATAGCTATGGAATAGTGCTGTTGGAAATCTTATGTTGCAGAAGAAACCTAGATGTTAATGTGTTGGAACCTGAGGAGATTCTTCTTGCTGGTTGGACTTATAAGTGCTTTATTGCAGGAGACGTAAACAAGCTTGTTCCTTCAGAAGCCATTGATAAAAATGTCATGGAAAATATGGTTAAGGTGGCACTTTGGTGTATCCAAGATGACCCTTTTCTCAGGCCAACAATGAAGGGTGTGGTGTTGATGTTAGAAGGGATTACTGATATAGCAATTCCTCCGTGTCCAAATTCGAATTTTGCATGA 2439 0.4108 MVMDASYTTTFTFLLFMSLPLSNVGAQTQSQLLARIAPGSSLSPGSSDYKSMWLSPSGQFAFGFYSQGNNGFAIGIWLVGKNKMNSTIVWTANRDDPPVTSTVKLQFTMKGTIILTDQQGQQKLIVNANTRASSASMLDSGNFVLYDNNNISSIIWQSFDHPTDTLLESQSLPCGGKLSSSLSETNHSTGRFQLNMQVDGNLVLYPAYIAETSWDAYWASDTVSANVKHHLYLKSTGLLQILDDSSDSSLIKILNDADEDQQETGGNQTIYRATLDFDGVFRLHARHVNNGSDKIIASFPGNNPCEVKGFCSLNSYCTFKDDKPLCNCLTGYKFIDANEKTLGCERNYSKAECRAEKDGLAFYDMVPMNNIVWKDHPYFETEDILSEKECSFACLVDCNCWAALYEEERCKKQGLPLRYVTRTHEADDSPAAAYIKVGNGSIENWKGNDTLFYPQPPLITSTKAVVHIIIVTSIFTALLCSAILISIHYVYKIRVLRYKRLTDTGNLGLNEEVTLRRFSYNELKRATNHFKEELGKGAFGSVYKGALNKGKRLIAVKRLEKVVEEGEKEFQAEVRSIGKTHHRNLVRLLGFCVEGSKRLLVYEYMSNGSLGKLLFGDQRRPDWNERVRIALDIARGILYLHEECDAPIIHCDLKPQNILMDKFWTAKISDFGLAKLLMPDQTRTFTMVRGTRGYMAPEWNKNVAISVKTDVYSYGIVLLEILCCRRNLDVNVLEPEEILLAGWTYKCFIAGDVNKLVPSEAIDKNVMENMVKVALWCIQDDPFLRPTMKGVVLMLEGITDIAIPPCPNSNFA* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4129 812 CDD B_lectin 54 162 IPR001480 -
Mtr4g4129 812 ProSitePatterns Protein kinases ATP-binding region signature. 534 557 IPR017441 GO:0005524
Mtr4g4129 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Mtr4g4129 812 Gene3D - 30 160 IPR036426 -
Mtr4g4129 812 PIRSF SRK 4 812 IPR024171 GO:0004674
Mtr4g4129 812 ProSiteProfiles Bulb-type lectin domain profile. 39 158 IPR001480 -
Mtr4g4129 812 Gene3D Phosphorylase Kinase; domain 1 496 604 - -
Mtr4g4129 812 PANTHER RUST RESISTANCE KINASE LR10-RELATED 29 810 IPR045874 GO:0004672
Mtr4g4129 812 ProSiteProfiles Protein kinase domain profile. 528 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4129 812 Gene3D Transferase(Phosphotransferase) domain 1 605 802 - -
Mtr4g4129 812 Pfam Protein kinase domain 530 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4129 812 CDD STKc_IRAK 534 798 - -
Mtr4g4129 812 Pfam D-mannose binding lectin 87 172 IPR001480 -
Mtr4g4129 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 187 246 IPR036426 -
Mtr4g4129 812 SMART blect_4 33 162 IPR001480 -
Mtr4g4129 812 SMART serkin_6 528 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4129 812 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1 29 810 - -
Mtr4g4129 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 205 IPR036426 -
Mtr4g4129 812 Gene3D - 162 295 IPR036426 -
Mtr4g4129 812 SUPERFAMILY Protein kinase-like (PK-like) 513 796 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4129 Mtr-Chr4 55177629 55180433 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4129 515 797 Receptor kinase-like Gene Family AT1G60800 44.178 2.51e-67 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr4g4129 Pkinase 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4129 - - ahf:112707609 987.252