Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4128 ATGGCTTCCACCCTTGCTTTGTTATCAATACTGTTCTCCATCTTCTTCATGCTATTTACATTAATAGAAGCCACACACAATACAACTGAAAAAACTCAACCCATTATCATTCCATTGGGGTCTTTCCTCGCTCCTAAAGGTGAAAATACTTCATGGCAATCAAGTTCTGGCCATTTTGCTTTTGGGTTTTACCCCAAAGGTAATGGTTTTGCTGTTGGAATATGGTTGGTTAATCCATCTGAAAACACAACCACTGTTGTGTGGACTGCTAACCGTGATGCTCCAGCAGTCTCCTCTAAATCTATGTTGAATTTGACAGAGCAAGGTCTGCTTCTTCAAAATGGAAACAGAGATTCAGCTATGAATAAAGACTTGAGAGATGATTCAGAGGAGAATTTGGTCTCTAAGGCATCTATGCATGATTCTGGCAACTTTGTGCTTTATGATGAGAATTCTACAGTTATATGGCAAAGCTTTGATCACCCAACAGACACCATATTAGGAGGTCAGAGTTTGACTGCTGATGATTATTTAATCTCTAGTATATCCAAGTCAGACCATTCAAGGGGATGTTTCTATCTCGGCATGCAAAATGATGGAAACCTTGTCGCTTACCCCTTGTACAGCAGATTCAGCGACCTGGATGCTTACTGGGCTTCAAATTCTTGGGATCTGACATACATACCCAAACAACTAAGTCTTAGCATTCAAGGCTTTCTTTGCCTAAATATGTCCGACGAAGATGATGGTGATAGGCTATGTCTCAACGATATCAATAAGCATAGTAAGAAGTTACACAACAACACAACTTCAATCTACCGTGCAACGTTTGATGTAGATGGAAACTTGAGATTGTATGAGCACCAATTTGACTTTGAGAGCAAGAATAGCTCGCGTGTGGTAATCTTGTGGCAAGCACTTAATGACACTTGTCAAGTGAAGGGGTTTTGTGGGTTGAACAGTTATTGCTCCTTCAATATGAGCGGTGATGCTGTATGCAAATGTTATCCTGGTTTCATCCCTTCCAACACTAAAAGCGTGCCTATAGACTGCGTACAGACGCATAGCAAAGATGACTGTGAAAGCATTGAAGACCGAACGTTGTTGTATAATTTTACTCACTTTGAGAATATGCATTGGGGGGATGTTCCATATTCTGTTATACCCGTGTTGATTGATATGGATACTTGTGAGAAGGCTTGCCGACAAGATTGTGTTTGTGGGGGAGCAATATATACCAACGGCAGCTGCAATAAATATAGGCTTCCACTTATACACGGCAAGTTTCAAAATGATTCTTCTTCCACTGTGTCTGTGGCCTTAATAAAGATTCCTTCAAATATTCCCATTATTATTTCACCTCCAACCTCAAATAACACCAACGTGCCTAAGCCTAAGGTTGTTATTGATAACAAGAAAAACCTAATAATGATCCTATCTCTTACTTTGGGTGTCGTTTCATTGATTTGTTTCATCACTGCGGTGTCCATTTTCTTCACTTACAGACGTCAAGTAAATAGGTATGCAATGTTGTCAGAAAGTGAAAAACTGGGATTTACAGAAGAATGCTCCTTGACCTCATTTTCTTTTGACGAACTTTCAGAATCAACCGGGGGCTTTTCAGATGAGATAGGGAGAGGATCATTTGGTGTTGTTTATAAAGGTACAATGGGCGACAATAACAGAATCATTGCTGTGAAAAGACTGGAGGAGAGAATTGTTGATGCAGGGGATAGGGAATTCCGAACGGAAGTTACTTCCATTGCTCGAACTCATCATAGGAATTTGGTTAAGCTTATTGGTTTTTGTATAGAAGGTTCAAAGAAGCTTCTTGTTTATGAATTTGTCAGCAAAGGGTCTCTTGCAAATATCCTCTTTGAAGGGGAAGTGAGACTATCTTGGAAAGATAGAATGAAACTTGCATTGGACGTGGCTAAAGGAATATTATATCTACACGAAGAGTGTGAAGTCCAAATTATCCATTGTAATATAAATCCTCAAAATATACTTATGGATGAAGCATGGAATGCAAAAATATCTGATTTTGGATTGGCAAGACTTTCAAAGAGGGGTCATTCAAGAACTAAAATAGAGGATGATGGCACAGTCAAGTATTTGGCACCTGAACGGCAGAAGGAGGATGCATCAGTATCGGTAAAAGCTGACATTTACAGTTTTGGTGTGGTATTATTGGAAATTATTTGCCGCAGAAGAAGTATAGAGATGAATAATATTCACTCGCCCGGTGAAATTCTTCTTTCCAGTTGGGCATATCAATGTTTTGAAGCAGGGCAGTTAAACAAGCTTATCAGACATGATGAGAAAGATGTGGATTGGAAGATATTGGAAAGAATGGTGAAAGTCGGGTTGTGGTGTGTGCAAGACCGACAACATCTCCGTCCTACAATGAAGAATGTAATTTTAATGTTGGAAGGTTTGGAAGATATTCCAGTTCCTCCCTCACCAGCTCGCTTGCTTGAATAG 2484 0.3965 MASTLALLSILFSIFFMLFTLIEATHNTTEKTQPIIIPLGSFLAPKGENTSWQSSSGHFAFGFYPKGNGFAVGIWLVNPSENTTTVVWTANRDAPAVSSKSMLNLTEQGLLLQNGNRDSAMNKDLRDDSEENLVSKASMHDSGNFVLYDENSTVIWQSFDHPTDTILGGQSLTADDYLISSISKSDHSRGCFYLGMQNDGNLVAYPLYSRFSDLDAYWASNSWDLTYIPKQLSLSIQGFLCLNMSDEDDGDRLCLNDINKHSKKLHNNTTSIYRATFDVDGNLRLYEHQFDFESKNSSRVVILWQALNDTCQVKGFCGLNSYCSFNMSGDAVCKCYPGFIPSNTKSVPIDCVQTHSKDDCESIEDRTLLYNFTHFENMHWGDVPYSVIPVLIDMDTCEKACRQDCVCGGAIYTNGSCNKYRLPLIHGKFQNDSSSTVSVALIKIPSNIPIIISPPTSNNTNVPKPKVVIDNKKNLIMILSLTLGVVSLICFITAVSIFFTYRRQVNRYAMLSESEKLGFTEECSLTSFSFDELSESTGGFSDEIGRGSFGVVYKGTMGDNNRIIAVKRLEERIVDAGDREFRTEVTSIARTHHRNLVKLIGFCIEGSKKLLVYEFVSKGSLANILFEGEVRLSWKDRMKLALDVAKGILYLHEECEVQIIHCNINPQNILMDEAWNAKISDFGLARLSKRGHSRTKIEDDGTVKYLAPERQKEDASVSVKADIYSFGVVLLEIICRRRSIEMNNIHSPGEILLSSWAYQCFEAGQLNKLIRHDEKDVDWKILERMVKVGLWCVQDRQHLRPTMKNVILMLEGLEDIPVPPSPARLLE* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4128 827 CDD B_lectin 54 162 IPR001480 -
Mtr4g4128 827 ProSitePatterns Protein kinases ATP-binding region signature. 544 567 IPR017441 GO:0005524
Mtr4g4128 827 Gene3D - 45 161 IPR036426 -
Mtr4g4128 827 PIRSF SRK 2 827 IPR024171 GO:0004674
Mtr4g4128 827 Gene3D - 162 313 - -
Mtr4g4128 827 SMART blect_4 43 162 IPR001480 -
Mtr4g4128 827 Gene3D Transferase(Phosphotransferase) domain 1 616 817 - -
Mtr4g4128 827 Pfam S-locus glycoprotein domain 268 342 IPR000858 GO:0048544
Mtr4g4128 827 Gene3D Phosphorylase Kinase; domain 1 502 615 - -
Mtr4g4128 827 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 1 825 - -
Mtr4g4128 827 Pfam Protein tyrosine and serine/threonine kinase 541 807 IPR001245 GO:0004672|GO:0006468
Mtr4g4128 827 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 224 IPR036426 -
Mtr4g4128 827 SUPERFAMILY Protein kinase-like (PK-like) 523 811 IPR011009 -
Mtr4g4128 827 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 825 - -
Mtr4g4128 827 Pfam D-mannose binding lectin 85 175 IPR001480 -
Mtr4g4128 827 ProSiteProfiles Protein kinase domain profile. 538 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4128 827 ProSiteProfiles Bulb-type lectin domain profile. 39 160 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4128 Mtr-Chr4 55170283 55173434 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4128 445 822 Receptor kinase-like Gene Family AT4G18250 37.789 9.88e-63 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr4g4128 PK_Tyr_Ser-Thr 2.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4128 - - cam:101496142 1191.41