Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4097 ATGGCCACCATCACCAAGTCCAAACCTTACATAGATATTGAACCTGACTACGACAGCAGCTCCTCATCCATCACCGTACCTGAATCAACCCGCAGCTGGATGAGTAACCTCAGCTTCGGAAGCCGCCGCCGTCGAAGCTCCGTCTCCGTTTCTTCCACCACCACATACACCTCTTCAGTATTAGGTTCCAACGCTAAGCCTCATAAGGCAAACCAAGTTGCATGGGAGGCTATGAGTCGACTCCGGCTTGACCAAGGTCGAGTCGGACTCGACCATTTCCGCCTCCTTAAGCGGCTTGGAAGCGGCGATATAGGGAATGTTTATCTTTGTCAGATAAGGAACCCTGTAGTTGGTTTGCCTCAGTGTTTCTATGCTATGAAAGTTGTTGATAGAGAAGCACTTGCTATAAGGAAGAAGCTACAAAGAGCAGAGATGGAGAAGGAGATTTTAGGGATGCTTGATCATCCTTTTTTACCTACTTTGTATACTGATTTTGATGCTTCTCATTACTCTTGTTTGGTTATGGAGTTTTGTCCTGGTGGTGATTTGTATGCTTGTCGCCAACGCCAGCCTGGGAAGCGCTTTTCATTATCATCCTCTAAGTTTTATGCTGCTGAAACACTATTGGCACTAGAGTATCTACACATGATGGGAATAGTATACAGAGATTTAAAGCCAGAGAATGTTTTAGTAAGAGAAGATGGACACATAATGCTTTCAGATTTTGATCTTTCACTCAAATGTGACGTTGTTCCAAAGCTCTTAAGAAGCAAAACAAGATTAGAACGAAGTATCAAAACAACTACTACAATGAGATGTTCAACACCTTCTTGCATTTCTCCCATGCAACCAGTTCTGTCTTGTTTCTTATCATCATCAACAAAGAAAAAGAAAACAAAACTTGAAACTGTTATTAGAGAAAATGTTCAAGAAGAGTTTGAGGTTGATCTTGATCCTGATTTTGTAGCTGAACCAATTGAAGCAAGATCAAAATCATTTGTGGGGACACATGAATATTTAGCACCAGAAGTTATATTAGGACAAGGTCATGGAAGTGCAGTGGATTGGTGGACATTTGGTGTTTTTTTGTATGAAATGTTATATGGAAGAACACCATTTAAAGGTGAGAACAATGAGAAAACATTGGTCAACATTCTTAAGCAACCTTTGACTTTTCCTAGGATTGGTGTTAGTAGTAATTATGAGTTTGAAGAGATGGTGAAAGTTCAAGATCTTATTAGCAAATTGTTGGTGAAGAATCCAAGTAAGAGAATTGGAAGCTGTTTGGGTTCTGTTGAGATTAAAAGACATGAGTTTTTTAAGGGTGTTAATTGGGCTTTGATTAGATCAGTTAGACCCCCTGAGGTTCCTAGTGACAAGAATAAGACTAGGAATAGAGTTTTGGTGCCTAAATTAAGCAAGAAAGATAGAGATCAACCATTTCAGCTTAAACATCAATTTGATTACTTCTAA 1473 0.3978 MATITKSKPYIDIEPDYDSSSSSITVPESTRSWMSNLSFGSRRRRSSVSVSSTTTYTSSVLGSNAKPHKANQVAWEAMSRLRLDQGRVGLDHFRLLKRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRKKLQRAEMEKEILGMLDHPFLPTLYTDFDASHYSCLVMEFCPGGDLYACRQRQPGKRFSLSSSKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKTRLERSIKTTTTMRCSTPSCISPMQPVLSCFLSSSTKKKKTKLETVIRENVQEEFEVDLDPDFVAEPIEARSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLVNILKQPLTFPRIGVSSNYEFEEMVKVQDLISKLLVKNPSKRIGSCLGSVEIKRHEFFKGVNWALIRSVRPPEVPSDKNKTRNRVLVPKLSKKDRDQPFQLKHQFDYF* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4097 490 SUPERFAMILY Protein kinase-like (PK-like) 75 457 IPR011009 -
Mtr4g4097 490 Gene3D Transferase(Phosphotransferase) domain 1 328 458 - -
Mtr4g4097 490 Gene3D Transferase(Phosphotransferase) domain 1 178 281 - -
Mtr4g4097 490 ProSiteProfiles Protein kinase domain profile. 93 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4097 490 CDD STKc_phototropin_like 91 457 - -
Mtr4g4097 490 Pfam Protein kinase domain 330 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4097 490 Pfam Protein kinase domain 94 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4097 490 PANTHER PROTEIN KINASE PINOID 2 13 490 - -
Mtr4g4097 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Mtr4g4097 490 Coils Coil 126 146 - -
Mtr4g4097 490 PANTHER FLIPPASE KINASE 1-RELATED 13 490 - -
Mtr4g4097 490 Gene3D Phosphorylase Kinase; domain 1 91 177 - -
Mtr4g4097 490 SMART serkin_6 93 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4097 Mtr-Chr4 54944265 54946891 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4097 10 490 AGC Kinase Gene Family AT2G26700 59.924 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mtr4g4097 Pkinase 1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4097 K08286 - gmx:100777988 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4097 4 54944265 54946891 Mtr4g4097 4 54944265 54946891 ECH