Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4092 ATGGAAGACAGAAAAGTTCACACAATCGCTGCTATATCAGTGATATCCTTAATAATAGTGATCATCATTTGTCGTGTTTCCTTAAAACTCTCAAGAGCATTCTTCTTAATATGCGGCGCATCAATCGCCGTAATTCTCGCTGTTTTTTCATGCATACTCATAAGACAACGTTACAACAAAAGAAGAAAAGTGTTAGAATCACAGTTGAAATCAGAAGGAAGAGAGCTTCGAATAGAGTACAGTTTCTTAAGAAAAGTTGCAGGTATACCAACAAAATATCGATACAAAGAACTTGAAGAAGCAACGGATAATTTTCAAGCTATCATCGGTAAAGGGTCATCAGCTTCAGTTTTCAAAGGCATTTTGAATGATGGAACTTCAGTTGCTGTGAAAAGAATTCATGGTGAAGAAAGAGGTGAAAGAGAATTTAGATCAGAAGTTTCAGCTATAGCTAGTGTTCAACATGTTAATCTTGTGAGACTTTTTGGTTATTGTAATTCTCCAACACCACCTAGGTATCTTGTTTATGAGTTTATTCCAAATGGTTCATTGGATTGTTGGATTTTTCCTGTGAAGGAAACAAGGACACGTAGATGTGGTTGTTTACCTTGGAATTTAAGGTATAAAGTTGCTATTGATGTTGCTAAAGCATTGAGTTATCTTCATCATGATTGTAGATCTACGGTTTTGCATCTTGATGTGAAGCCAGAGAATATACTTTTAGATGAAAATTATAAAGCTTTAGTTTCTGATTTTGGTCTTTCAAAACTTGTTGGAAAAGATGAGAGTCAAGTTTTGACAACAATAAGAGGAACTAGAGGCTATTTAGCACCTGAATGGTTATTAGAACGTGGAATATCTGAGAAAACTGATATTTATAGTTTTGGAATGGTTTTGTTGGAGATAGTAGGAGGTAGGAGAAATGTTTCAAAAGTGGAGGATCCTAGAGATAACACTAAGAAAAAGTGGCAATTTTTTCCTAAAATTGTGAATGAGAAATTAAGAGAAGGGAAATTGATGGAAATTGTGGATCAAAGGGTAGTTGATTTTGGAGGTGTTGATGAGAATGAGGTGAAAAGGTTGGTGTTTATTGCTTTGTGGTGTATACAAGAGAAGCCAAGGTTGAGGCCTAGTATGGTTGAAGTTGTTGACATGCTTGAAGGACGTGTGAGAGTGGAGGAGCCACCAGGGACTAGAATGATTCTTGTTGATTTGTTAGCTGATGATGAAGATCCTACAGATCTTAATAATCTAGCAAGGTTATTGACTCCTGTCTCTAGTAATGTTGAGTGTACATCTACTTACTCTTTAGGATCCACTATTTTTTCTGGTAGATAG 1338 0.3587 MEDRKVHTIAAISVISLIIVIIICRVSLKLSRAFFLICGASIAVILAVFSCILIRQRYNKRRKVLESQLKSEGRELRIEYSFLRKVAGIPTKYRYKELEEATDNFQAIIGKGSSASVFKGILNDGTSVAVKRIHGEERGEREFRSEVSAIASVQHVNLVRLFGYCNSPTPPRYLVYEFIPNGSLDCWIFPVKETRTRRCGCLPWNLRYKVAIDVAKALSYLHHDCRSTVLHLDVKPENILLDENYKALVSDFGLSKLVGKDESQVLTTIRGTRGYLAPEWLLERGISEKTDIYSFGMVLLEIVGGRRNVSKVEDPRDNTKKKWQFFPKIVNEKLREGKLMEIVDQRVVDFGGVDENEVKRLVFIALWCIQEKPRLRPSMVEVVDMLEGRVRVEEPPGTRMILVDLLADDEDPTDLNNLARLLTPVSSNVECTSTYSLGSTIFSGR* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4092 445 Gene3D Phosphorylase Kinase; domain 1 66 178 - -
Mtr4g4092 445 ProSiteProfiles Protein kinase domain profile. 103 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4092 445 PANTHER RECEPTOR-LIKE KINASE 1 445 - -
Mtr4g4092 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Mtr4g4092 445 SMART serkin_6 103 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4092 445 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 445 - -
Mtr4g4092 445 Coils Coil 55 75 - -
Mtr4g4092 445 SUPERFAMILY Protein kinase-like (PK-like) 86 387 IPR011009 -
Mtr4g4092 445 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Mtr4g4092 445 Pfam Protein kinase domain 107 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4092 445 Gene3D Transferase(Phosphotransferase) domain 1 179 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4092 Mtr-Chr4 54899892 54901592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4092 1 398 Receptor kinase-like Gene Family AT5G20050 65.087 0.0 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr4g4092 Pkinase 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4092 - - gmx:100779485 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4092 4 54899892 54901592 Mtr4g4092 4 54899892 54901592 ECH
Mtr4g4092 4 54899892 54901592 Mtr2g1996 2 28927930 28929649 PCT