Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4090 ATGGAGCTAGAGCTCTTGTCTTGGCTCAAACTTGTTTCATTTTCTTTCATATTTCTTCTATGTGTTCTCAAAGTAACAGTGTTACTATGGTGGAGACCAAGAAAAATTGAAGGCTATTTTGCTAAACAAGGAATTAGAGGACCTCCTTATCATTTCTTCATTGGAAATGTTAAAGAACTTGTTGGTATGATGTTGAAAGCTTCTTCTCAACCCATGCCTAATTTCTCTCACAACATTCTTCCTAGAGTCCTTTCTTTCTATCATCACTGGAAGAAAATTTACGGTGGAATGTTCCTAGTTTGGTTTGGACCCACTGTTCGTCTTACAGTGTCTGATCCAGACCTTATAAGGGAAATCTTCACATCCAAGTCAGAATTTTATGAAAAAAATGAAGCCCCCCCACTTGTGAAGCAGCTAGAAGGTGATGGTCTCCTTAGTCTTAAAGGAGAAAAATGGGCTCACCATCGCAAAATTATCTCTCCCACTTTTCACATGGAAAATCTCAAATTGCTGATACCGGTGATGGCAACAAGCGTGGTTGAGATGTTGGAAAAATGGTCGGAAATGAGTGACAAAGGTGAGGTGGAAATTGAAGTTTCTGAGTGGTTTCAAACCCTAACTGAAGATGTTATTACTAAGACCGCGTTTGGAAGCAGCTACCAAGATGGCAAAGCCATTTTTCACTTACAAGCCCAACAAATGATCTTAGCTGCTGATGCTTTTCAGAAAATTTTCATTCCCGGTTACAGATTCTTTCCTACAAGAAAGAATATAAAATCTTGGAAACTGGATAAAGAAATAAAGAAATCATTGGTGAAGCTAATAAAACGAAGGGAAGAGAATTTGAATAATGGGAATGAAGAAAGAATTGAAAAAGGTCCAAAAGATTTACTAGGACTAATGATAGAAGCTAGCTCCAACAACAACAACACCAATGTGACAGTGGATGATATCGTGGAAGAGTGCAAGAGCTTTTTCTTTGCAGGCAAACAAACCACATCAAACTTGCTGACGTGGACGACCATTCTCTTAGCAATGCACCCACAATGGCAAGTACAGGCACGTGATGAGGTCCTAAAGATGTGTGGGTCACGTGACCTTCCAACTAAAGATCATGTTGTAAAGCTTAAGACGCTGAACATGATTGTAAACGAGTCACTAAGATTGTACCCACCAACAATTGCGACGATCCGACGGGCTAAAACAGATGTAGATTTGGGAGGGTACAAGATACCACGTGGGACAGAGCTATTGATTCCAATCCTAGCCGTTCATCATGATATAGCAATATGGGGCAATGATGTAAATGAATTCAATCCTGGCCGTTTCTCTGAAGGTGTAGCTAGAGCTGCAAAACATCCAGTGGCATTCATACCTTTTGGCCTTGGTGTGCGCACATGTATAGGACAAAACCTTGCAGTGCTACAAACAAAATTGGCACTTGCAATCATACTGCAGCGTCTTAGTTTCAGGTTGGCCCCTAGTTATCAACATGCACCAACGGTTCTGATGCTACTTTATCCTCAGTATGGTGCACCAATCATATTCAACCAATTGTCCATAGTGGATAACCCAAATCAAGGATCCTCATAG 1593 0.4055 MELELLSWLKLVSFSFIFLLCVLKVTVLLWWRPRKIEGYFAKQGIRGPPYHFFIGNVKELVGMMLKASSQPMPNFSHNILPRVLSFYHHWKKIYGGMFLVWFGPTVRLTVSDPDLIREIFTSKSEFYEKNEAPPLVKQLEGDGLLSLKGEKWAHHRKIISPTFHMENLKLLIPVMATSVVEMLEKWSEMSDKGEVEIEVSEWFQTLTEDVITKTAFGSSYQDGKAIFHLQAQQMILAADAFQKIFIPGYRFFPTRKNIKSWKLDKEIKKSLVKLIKRREENLNNGNEERIEKGPKDLLGLMIEASSNNNNTNVTVDDIVEECKSFFFAGKQTTSNLLTWTTILLAMHPQWQVQARDEVLKMCGSRDLPTKDHVVKLKTLNMIVNESLRLYPPTIATIRRAKTDVDLGGYKIPRGTELLIPILAVHHDIAIWGNDVNEFNPGRFSEGVARAAKHPVAFIPFGLGVRTCIGQNLAVLQTKLALAIILQRLSFRLAPSYQHAPTVLMLLYPQYGAPIIFNQLSIVDNPNQGSS* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4090 530 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g4090 530 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g4090 530 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g4090 530 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g4090 530 SUPERFAMILY Cytochrome P450 40 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g4090 530 Pfam Cytochrome P450 84 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g4090 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Mtr4g4090 530 PANTHER CYTOCHROMEA2 6 514 - -
Mtr4g4090 530 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 514 - -
Mtr4g4090 530 Gene3D Cytochrome P450 30 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g4090 530 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g4090 530 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g4090 530 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g4090 530 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g4090 530 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g4090 530 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4090 Mtr-Chr4 54861355 54865930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4090 1 520 Cytochrome P450 AT2G26710 77.099 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4090 K15639 - gmx:100780027 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4090 4 54861355 54865930 Mtr4g4090 4 54861355 54865930 ECH