Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4082 ATGGTAGTACCGCCGTTTCTAACTTGTGGGAGGAGTGGGAAGGGTAAGGATGAAGAAGAAGAAAAAAAAGAAAAAGAAAAGGCAGAAGAAGAAGTACATGACAATCTGGTGTGGTGTGAAGATAGAAAGGAAAATGATTACCATTGTTCTATTGCTACATCTCAATCTAATACTGTAATGGAGGATTTTTATCAAGTTGAGTTTGGCAAGAACTCACTGTTTGTTGGAGTTTATGATGGCCATAAAGGTCTTGATGCCGCCCGGTTTATCCGTGTTTGTCTCTTCCCTGAACTAAGTAGTGAGTCTTCTTCCTTTTCTCTTTTATGCTTTCATTATTCAGATGACTTTCAATCTTTGCACAACTTAGAGATTATTGGGCTTGTTACGGAGAACAAAGTCGTATCTGAAGATATTATGGAACAAGCTGTTGATTTTATTGAGAAGGGCTTTAAGGAATATGTTACAAATAATATTGATGACGATGGAAGGGTAGGAAGTGTTGGTTCCTGCTGCCTATTTGGAATAATATGGGGAAGGACTCTTTTTGTTGCAAATGTTGGAGATTCCCGCGCGATTCTTGGTTCTTCTAAGGGTTTTTTTAAAAGACCACATGTTGTTCAACTTACAGTTGATCACCATGTTAGTCATGCAGCTGCTAGAGAAGAGATCCGGAACCATATCACTAATGATCCATTTGTTTTGTGCAAGAATCGTGGATCATTGCGAGTTAAAAGCTTAATTGAGATAACCAGAAGCATTGGGGATGCATATCTAAAGTGGTCGGATCCACATCCAAGCTTTGAAACATTTTCTAGATATGAAGCAAATGTAATCTCAGAAAAACCATTTACAGATAGAAGAGATATAGATGAGAGTGATAAATTCCTAATATTTGCTTCACATGGTTTTTGGAAACTTATGACAAATTCGGAAGCAGCTGATATTGTTTACAACAATAGCCAAGATGGAATCTCAAAAAGACTTGTGAGAGCTGCTCTAGAGAAGGCCATCAATGATATTATCACTTATTGCAATCTTCAGAACTTGAAAGCAGGCAATGGTTTGCTGGGTCGTCGTCATTATTATGACGATGTCACTGTAATTGTCATATTCTTGAACAAAAGGAGCGACACACCAACGACGGAACCCGAATTTCAATCAACAACTTCTACAAATGAGTTGAAGATATCCAAGTTTGTTCATCTGTAG 1209 0.3788 MVVPPFLTCGRSGKGKDEEEEKKEKEKAEEEVHDNLVWCEDRKENDYHCSIATSQSNTVMEDFYQVEFGKNSLFVGVYDGHKGLDAARFIRVCLFPELSSESSSFSLLCFHYSDDFQSLHNLEIIGLVTENKVVSEDIMEQAVDFIEKGFKEYVTNNIDDDGRVGSVGSCCLFGIIWGRTLFVANVGDSRAILGSSKGFFKRPHVVQLTVDHHVSHAAAREEIRNHITNDPFVLCKNRGSLRVKSLIEITRSIGDAYLKWSDPHPSFETFSRYEANVISEKPFTDRRDIDESDKFLIFASHGFWKLMTNSEAADIVYNNSQDGISKRLVRAALEKAINDIITYCNLQNLKAGNGLLGRRHYYDDVTVIVIFLNKRSDTPTTEPEFQSTTSTNELKISKFVHL* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4082 402 PANTHER ALPHABET, ISOFORM E-RELATED 33 377 - -
Mtr4g4082 402 SUPERFAMILY PP2C-like 55 374 IPR036457 -
Mtr4g4082 402 MobiDBLite consensus disorder prediction 12 29 - -
Mtr4g4082 402 Gene3D - 17 380 IPR036457 -
Mtr4g4082 402 Pfam Protein phosphatase 2C 73 339 IPR001932 -
Mtr4g4082 402 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 33 377 - -
Mtr4g4082 402 SMART PP2C_4 45 370 IPR001932 -
Mtr4g4082 402 CDD PP2Cc 47 372 IPR001932 -
Mtr4g4082 402 MobiDBLite consensus disorder prediction 1 29 - -
Mtr4g4082 402 ProSiteProfiles PPM-type phosphatase domain profile. 48 372 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4082 Mtr-Chr4 54759431 54762135 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4082 36 401 PP2C-type Phosphatase Gene Family AT5G06750 35.372 7.72e-63 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4082 K01102 - mtr:MTR_4g113480 705.286