Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4080 ATGATGATAGAATTAAAATCTTTCAAAAATGGGGTTGAGCGAGATGCCGGAACAGCCATAGCTGGAAATGTGTTTGGTCAAAGTTGTGTGCTTTGTAATAAGCCACAACTTTTTACCGCTAAAACTAGAGAAGTATGTCAGCTCCTTAAGCTCGACCGTGACACACTCAACGACATCCTTAAGGAGAATCCCATTGCTGCATCCAACATAATGGATAATGAAATCTTGATATTGAAAGAGCTAGTGGAAGAGCATAATGATCCAGACATGACTGATGTTTTGGGTGAAATTGAAAGGAAGAAGGCAAGGGATGAAGCTCCTGGAATAGCATAA 333 0.4024 MMIELKSFKNGVERDAGTAIAGNVFGQSCVLCNKPQLFTAKTREVCQLLKLDRDTLNDILKENPIAASNIMDNEILILKELVEEHNDPDMTDVLGEIERKKARDEAPGIA* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4080 110 CDD CAP_ED 21 67 IPR000595 -
Mtr4g4080 110 Gene3D Jelly Rolls 4 91 IPR014710 -
Mtr4g4080 110 PANTHER POTASSIUM CHANNEL AKT1 5 103 - -
Mtr4g4080 110 PANTHER POTASSIUM CHANNEL AKT1 5 103 IPR045319 GO:0005249|GO:0006813
Mtr4g4080 110 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Mtr4g4080 110 ProSiteProfiles cAMP/cGMP binding motif profile. 22 60 IPR000595 -
Mtr4g4080 110 SUPERFAMILY cAMP-binding domain-like 10 74 IPR018490 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4080 4 103 Ion Channels AT2G26650 41.000 6.25e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4080 K21867 - mtr:MTR_4g113370 150.599