Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4079 ATGTCTTTGGTGAACATTCTGAAACAAGTTGCTGATGACATGGAAAGAGATATTAAGAGGTGCGCGAGAGAAAACACCGAGCTAGACAAAATAGGTTCTTCATGTTTAGTGGCTTTGATATGGGGAGAGAGACTTTATATCCTAAACATTGGGGATTCTAGACTATTGTTGGGGTCAGAATTAGGAAACACGGAGATTATAAAAGCCAAACAACTGAGTACTGATCATAATTGCAAAAACGAGCTAATCAGGATAAAAGTTCAGAAACAACATCCAGATTCAAAGATTTTGAACAAAGATAGTTGCAAGATTACTAGAGTTATTGGAGATGCACACCTGAAGAGAGAGTGCAATTCGTCAGCTGAACCAGAAATCATTTCAAGAGACATAGAGAAGTGTGATAGGTGCATTATCATTGCATCACACGGATTTTGGAAACTCATGTCAAATGAACAAACAGCTTTAATTGTTGAGAGAAATCGGCAACAAGGAATTGCAAAAAAGCTTTTGAGGGAAGCTCTAAAGGAGGCTGCTAAGAGAAAAGAAATTGACTATGAACAGCTTATGAAGAAAGCTGAGGGACCTGAGGGAAAACATATATACCATGAAGACATAACGGTCATTGTTGTTTTCTTAAACAAAAAGAATTGGTGGCGCAAAGACATACAAAACATGTCTTACAGGGGTTTTAGAAATACAACAGTGAAATCTGTATTTGCATATGATTATTGA 732 0.3702 MSLVNILKQVADDMERDIKRCARENTELDKIGSSCLVALIWGERLYILNIGDSRLLLGSELGNTEIIKAKQLSTDHNCKNELIRIKVQKQHPDSKILNKDSCKITRVIGDAHLKRECNSSAEPEIISRDIEKCDRCIIIASHGFWKLMSNEQTALIVERNRQQGIAKKLLREALKEAAKRKEIDYEQLMKKAEGPEGKHIYHEDITVIVVFLNKKNWWRKDIQNMSYRGFRNTTVKSVFAYDY* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4079 243 Coils Coil 4 31 - -
Mtr4g4079 243 SUPERFAMILY PP2C-like 3 213 IPR036457 -
Mtr4g4079 243 SMART PP2C_4 1 210 IPR001932 -
Mtr4g4079 243 Pfam Protein phosphatase 2C 15 179 IPR001932 -
Mtr4g4079 243 Gene3D - 3 215 IPR036457 -
Mtr4g4079 243 ProSiteProfiles PPM-type phosphatase domain profile. 1 212 IPR001932 -
Mtr4g4079 243 PANTHER ALPHABET, ISOFORM E-RELATED 5 230 - -
Mtr4g4079 243 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 5 230 - -
Mtr4g4079 243 Coils Coil 171 191 - -
Mtr4g4079 243 CDD PP2Cc 2 212 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4079 Mtr-Chr4 54699082 54700163 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4079 18 240 PP2C-type Phosphatase Gene Family AT5G06750 33.594 1.07e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4079 K01102 - mtr:MTR_4g113345 482.256