Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4075 ATGGCTGCGGTTCAGTCAAATGTAAATATGGAAGATCACAGTGAAGTTAAGGTTGGCAATGGTGCACTCTTTGTTGGAGTTTATGATGGCTACAAAGGGCATGTTCAGGAGAATGATAACAATATGTCTCTAGACATTCCTAGGAAAGTTGTTTCTGAAATTGAGACAGGGTTTATTGAGTTTGCCCGAAGACATTACGTGCAACTTGGTCAACCAAAGATTGGTATAGTTAGTTCAGGTTGTCTGATTTGTATCATAGAGAGAAGGACATTATATCTCGCCAACGTTGGAGACTCGCGCGCTATACTTGGTTCTAAGATGGGTATTGGTCCATTTAAAAGACTGTGTGTTAAGCAAATGGCTAGAGATCACAGTTGTAATAATCAGAATATTCGAGATGAACTCGCTGTATTGCATGATGATAATTGGATTTGCAACTATAATGACGGAGCATGGCGTGTTAGGAACACAAGCAGCGAGGTGTCTTTGGTGTCTGGCACATGA 504 0.4087 MAAVQSNVNMEDHSEVKVGNGALFVGVYDGYKGHVQENDNNMSLDIPRKVVSEIETGFIEFARRHYVQLGQPKIGIVSSGCLICIIERRTLYLANVGDSRAILGSKMGIGPFKRLCVKQMARDHSCNNQNIRDELAVLHDDNWICNYNDGAWRVRNTSSEVSLVSGT* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4075 167 ProSiteProfiles PPM-type phosphatase domain profile. 1 167 IPR001932 -
Mtr4g4075 167 PANTHER ALPHABET, ISOFORM E-RELATED 3 157 - -
Mtr4g4075 167 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 3 157 - -
Mtr4g4075 167 Pfam Protein phosphatase 2C 39 129 IPR001932 -
Mtr4g4075 167 Gene3D - 1 159 IPR036457 -
Mtr4g4075 167 SUPERFAMILY PP2C-like 7 136 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4075 Mtr-Chr4 54644883 54645806 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4075 1 155 PP2C-type Phosphatase Gene Family AT5G06750 38.286 4.48e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4075 K01102 - gmx:100806476 112.464