Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4071 ATGCCTTCTAGTTCAAGTCTTGTTATTTTCATTTTCCTTCATTTTATTCTTTTCTTTAGTTTCCGAGTCAACTCGGAACCGGTTCAAGATAAGCAAGCACTCCTTGCTTTCATTTCACAAACACCACACTCGAACCGGGTTCAATGGAACGCTTCGGACTCGGTTTGTAACTGGGTCGGTGTTCAATGTGACGCTACAAATTCATCTGTTTATTCTCTCCGTTTACCCGCCGTTGATCTCGTCGGCCCCCTCCCACCCAACACAATCGGACGGCTCACAAATCTCCGTGTCCTCAGTCTCCGTTCAAACGGCCTCACCGGTGAGATCCCCACCGATTTCTCCAATTTAACTTTTCTTCGTAGCATATATCTTCAGAAGAATAAATTCTCCGGTGAGTTCCCGGCGAGTTTAACTCGCTTAACTCGTTTGACTCGGTTGGATCTCTCTTCAAACAACTTCACCGGTTCAATTCCATTCTCCATCAACAATTTAACTCATCTCAGTGGTTTGTTCTTGGAGAATAACACATTCTCCGGTAGTCTTCCAAGTATCACTGCAAATTTGAACGGTTTCGATGTTTCCAATAACAATCTCAATGGTTCAATCCCAAAGACACTCTCGAAGTTCCCCGAAGCATCATTCGCTGGAAACTTAGATCTCTGTGGTCCACCGTTGAAAACATCATGTAGTCCGTTTTTCCCGGCGCCGGCGCCGTCACCGGACAACATTCCACCGGCGGACAAACCAAAGAAAAAATCCAAAAAACTTTCCACCGGAGCCATTGTCGCAATTGTAGTTGGTTCAATTCTCTTCCTAGCAATACTGCTATTACTATTATTACTCTGTCTCCGAAAACGCCGTCGCCGGACACCAGCAAAACCACCAAAACCAGTAGTAGCAGCACGTTCAGCTCCAGCTGAAGCCGGTACATCGTCTTCAAAAGACGATATAACAGGCGGTTCAGCCGAAGCAGAGAGGGAGAGGAACAAACTGGTGTTTTTCGACGGTGGAATATACAGTTTTGATTTGGAGGATTTGCTTAGAGCTTCTGCGGAGGTATTAGGAAAGGGAAGTGTTGGAACTTCGTATAAAGCGGTGTTGGAAGAAGGAACAACGGTGGTTGTTAAAAGGTTGAAAGATGTTGTTGTTACTAAAAAAGAGTTTGAGATGCAAATGGAGATTTTGGGAAAGATTAAGCATGATAATGTGGTTCCATTAAGAGCTTTTTACTACTCTAAAGATGAAAAATTGCTTGTTTATGATTACATGGCCGCCGGAAGCTTATCTGCACTTCTTCACGGTAGCAGAGGATCTGGACGAACGCCGCTAGATTGGGACAACCGGATGAGAATAGCACTAGGTGCATCAAGAGGAGTAGCATGCCTCCACGCATCAGGCAAAGTAGTCCACGGCAACATCAAATCCTCCAACATCCTCCTCAAAGGACCCGACAATGACGCCAGTGTTTCAGATTTCGGCCTCAACCCATTATTCGGAAATGGATCCCCATCAAACCGTGTTGCAGGCTACCGGGCACCTGAAGTTCTAGAAACCCGAAAAGTCACATTCAAATCTGATGTATACAGCTTTGGAGTCTTACTCTTGGAGCTATTAACAGGCAAAGCACCCAATCAAGCTTCACTTGGTGAAGAAGGCATTGATCTACCAAGATGGGTCCAATCCGTTGTTCGTGAAGAATGGACCGCAGAAGTTTTTGATGCTGAATTGATGAGGTTTCATAACATTGAAGAGGAAATGGTTCAGTTGCTACAAATTGCAATGGCTTGTGTTTCTATTGTGCCTGATCAAAGACCAAGTATGCAAGATGTGGTACGTATGATTGAAGATATGAATCGTGGGGAAACTGATGAGGGACTTCGACAGTCGTCGGATGATCCTTCTAAAGGATCTGAGGGTCATACTCCTCCTCCTGAATCAAGGACTCCACCTAGATCACGCACACCTTAG 1968 0.4502 MPSSSSLVIFIFLHFILFFSFRVNSEPVQDKQALLAFISQTPHSNRVQWNASDSVCNWVGVQCDATNSSVYSLRLPAVDLVGPLPPNTIGRLTNLRVLSLRSNGLTGEIPTDFSNLTFLRSIYLQKNKFSGEFPASLTRLTRLTRLDLSSNNFTGSIPFSINNLTHLSGLFLENNTFSGSLPSITANLNGFDVSNNNLNGSIPKTLSKFPEASFAGNLDLCGPPLKTSCSPFFPAPAPSPDNIPPADKPKKKSKKLSTGAIVAIVVGSILFLAILLLLLLLCLRKRRRRTPAKPPKPVVAARSAPAEAGTSSSKDDITGGSAEAERERNKLVFFDGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFEMQMEILGKIKHDNVVPLRAFYYSKDEKLLVYDYMAAGSLSALLHGSRGSGRTPLDWDNRMRIALGASRGVACLHASGKVVHGNIKSSNILLKGPDNDASVSDFGLNPLFGNGSPSNRVAGYRAPEVLETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMACVSIVPDQRPSMQDVVRMIEDMNRGETDEGLRQSSDDPSKGSEGHTPPPESRTPPRSRTP* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4071 655 Gene3D Ribonuclease Inhibitor 188 227 IPR032675 -
Mtr4g4071 655 MobiDBLite consensus disorder prediction 291 323 - -
Mtr4g4071 655 PANTHER OS05G0480400 PROTEIN 10 635 - -
Mtr4g4071 655 Gene3D Transferase(Phosphotransferase) domain 1 423 635 - -
Mtr4g4071 655 Pfam Protein kinase domain 351 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4071 655 CDD STKc_IRAK 354 617 - -
Mtr4g4071 655 Pfam Leucine Rich Repeat 94 116 IPR001611 GO:0005515
Mtr4g4071 655 SUPERFAMILY L domain-like 29 209 - -
Mtr4g4071 655 MobiDBLite consensus disorder prediction 616 655 - -
Mtr4g4071 655 Pfam Leucine rich repeat N-terminal domain 29 64 IPR013210 -
Mtr4g4071 655 PANTHER OS05G0588300 PROTEIN 10 635 - -
Mtr4g4071 655 SUPERFAMILY Protein kinase-like (PK-like) 352 616 IPR011009 -
Mtr4g4071 655 ProSiteProfiles Protein kinase domain profile. 348 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g4071 655 Gene3D Phosphorylase Kinase; domain 1 317 422 - -
Mtr4g4071 655 Gene3D Ribonuclease Inhibitor 28 185 IPR032675 -
Mtr4g4071 655 MobiDBLite consensus disorder prediction 616 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4071 Mtr-Chr4 54586526 54590451 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4071 4 635 Receptor kinase-like Gene Family AT5G58300 53.271 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr4g4071 Pkinase 5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4071 - - gmx:100806857 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4071 4 54586526 54590451 Mtr4g4071 4 54586526 54590451 ECH