Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4035 ATGACTGCCATCTTCAAAGCTTCCTCACACACATTTTTCCTTTGCTTGATTCTTTTTTCTGCTTCCCAATTTTTGCTCATCAATTGTACTGAATTTGAAGTCGGTGGCAAAACTGGTTGGGTCGTCCCTAACTCAAAGGACGGTGATGAAATGTACAACAAATGGGCTTCTCAAAACAGATTCAAAATTGATGACACTATTCATTTCAAGTACGAGAAAGATTCAGTGATGGTGGTTAGTGAAGAAGAATATGAGAATTGCAAATCGACTCGTCCACTCTTCTTCGGAAACAATGGCAACACAGTTTTCAAATTTGAACGACCAGGATTGTTCTACTTCATTAGTGGTGTTAGTGGTCATTGTACAAGAGGACAGAAAATGATCATCAAGGTTTTGGATGTTGAACCTGAACCAACAGCATCCTCACCACAATCTGCAAATGAGAATGCACCAATAGCACATTCTAAAGCTGCTCAAATAACTCCTATTACTATCACAGCGTTCACACTCTTTGCTTTGTCATTCCTTGGCATGATTTATGCTTGA 546 0.3919 MTAIFKASSHTFFLCLILFSASQFLLINCTEFEVGGKTGWVVPNSKDGDEMYNKWASQNRFKIDDTIHFKYEKDSVMVVSEEEYENCKSTRPLFFGNNGNTVFKFERPGLFYFISGVSGHCTRGQKMIIKVLDVEPEPTASSPQSANENAPIAHSKAAQITPITITAFTLFALSFLGMIYA* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4035 181 CDD OsENODL1_like 30 132 IPR041846 -
Mtr4g4035 181 SUPERFAMILY Cupredoxins 29 132 IPR008972 -
Mtr4g4035 181 Pfam Plastocyanin-like domain 45 125 IPR003245 GO:0009055
Mtr4g4035 181 PANTHER EARLY NODULIN-LIKE PROTEIN 5 13 144 - -
Mtr4g4035 181 ProSiteProfiles Phytocyanin domain profile. 30 133 IPR003245 GO:0009055
Mtr4g4035 181 Gene3D - 29 135 IPR008972 -
Mtr4g4035 181 PANTHER BLUE COPPER PROTEIN 13 144 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4035 Mtr-Chr4 54162954 54164049 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4035 11 173 Phytocyanin Superfamily AT1G48940 48.276 1.36e-55 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4035 - - mtr:MTR_4g112310 269.626