Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4026 ATGGTAGAAGTAGCTCAACAGTTTGAGTCCATGGCCGATGCCGGAGCCTTCAAAACTTTCCCTCAACAAGCTGGTACTATCCGCAAAAATGGTTACGTCCTCATCAAGGGACGCCCTTGCAAGGTTGTTGAAGTTCAGACTTCAAAGACCGGGAAACACGGCCATGCTAAATGTCATTTTGTTGGGATTGATATGGTCACTGCTGAGAAACTTGAAGATATCGTGCCTTTTTCCCACAACTGTGATGTTCCCCACGTGGTTGAGGATGGATTTGTGGTTTGA 282 0.4645 MVEVAQQFESMADAGAFKTFPQQAGTIRKNGYVLIKGRPCKVVEVQTSKTGKHGHAKCHFVGIDMVTAEKLEDIVPFSHNCDVPHVVEDGFVV* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4026 93 SUPERFAMILY Translation proteins SH3-like domain 15 86 IPR008991 -
Mtr4g4026 93 Gene3D - 3 85 IPR014722 -
Mtr4g4026 93 PANTHER BNAA07G09420D PROTEIN 8 86 - -
Mtr4g4026 93 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 8 86 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Mtr4g4026 93 TIGRFAM eIF_5A: translation elongation factor IF5A 20 86 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Mtr4g4026 93 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 50 57 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4026 Mtr-Chr4 54076845 54077940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4026 1 92 Eukaryotic Initiation Factors Gene Family AT1G13950 68.627 8.63e-46 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4026 K03263 K02180 pda:103704441 154.836