Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4023 ATGGCAATGGAGATTACAGCCATGTCTTCACTACCAACACCAAAACCTTCTCTTCCATCTCCTTCTACCTTACCTCACACAATCACCACTTTCTCAAAACCTCAACTTAGACGCATATCATTACCAACATCAACCACCATTTCACTACTTACTCTCTTCACCCCTCCAAATGAAGCTAGAGCTGCTGTTAACATCTCCAAGGACCAAATTGTTTCTTCTCTCACCCAAGTGGAGCAGACTATTGATCAGGTTCAGGTGGTTGGTTCTGGTTTTTTGGACTCAGCACAACGTGTTGCTGAAGCTGTAGGGAGTGCTTTGAAGCCTGGCTTCGATACGGCGTTGCCGATTGTGCAGCAGGCTGGACAAGAGGCTTTGAAAATTGCTTCCCCAGCCTTCTCTGAGGCTTCCAAGAAGGCTCAAGAAGCACTTCAGAGCTCTGGTCTTGATACCCAAACAGCTGCTAAGACAGTGGCAGATGCTGCACAACAAACAACCAAGGTGATTGAAGGTGCCAAGCCAATAGCCTCATCAACCATGGAAACTATAACTTCATCAGATCCTACCGTGATTGCTGGAACAGCTGGAGCACTATTCATTGCATACCTCTTGTTTCCTCCTATCTGGTCTGCCATCTCCTTCAATTTTCGCGGGTACAAAGGAGACTTGACACCAGCTCAAACACTTGATATGTTATGCACACAAAACTACATTTTGATTGATATTAGGTCAGAGAAGGATAAGGACAAATCCGGTATTCCTCGCCTTCCGTCTAGTGCTAAAAACAAGATGGTTGCCATTCCATTGGAAGAAGTGCCAAACAAAATACGGGGACTGGTAAGGAATGTGAAGAGAGTGGAAGCTGAAATAGCAGCATTAAAGATTTCATATCTGAAGAAAATCAACAAAGGCACCAACATTGTGATCTTGGACTCGTACTCGGACTCGGCAAAGATAGTTGCTAGAACACTAACAGGGCTTGGATTTAAGAACACGTGGATTGTTGGTGATGGATTTTCTGGAGGCAAAGGGTGGTTACAGAGTAGATTAGGAACAGATTCATATAAATTTTCGTTTGCAGAGGTGTTGTCACCATCCAGAATCATCCCTGCAGGTGTTAGAGGAGGTTTTGGAACAACCAGCAGGCAATCTACTCAGAAACTTCTTCCTGGGGCTGACTGA 1179 0.4478 MAMEITAMSSLPTPKPSLPSPSTLPHTITTFSKPQLRRISLPTSTTISLLTLFTPPNEARAAVNISKDQIVSSLTQVEQTIDQVQVVGSGFLDSAQRVAEAVGSALKPGFDTALPIVQQAGQEALKIASPAFSEASKKAQEALQSSGLDTQTAAKTVADAAQQTTKVIEGAKPIASSTMETITSSDPTVIAGTAGALFIAYLLFPPIWSAISFNFRGYKGDLTPAQTLDMLCTQNYILIDIRSEKDKDKSGIPRLPSSAKNKMVAIPLEEVPNKIRGLVRNVKRVEAEIAALKISYLKKINKGTNIVILDSYSDSAKIVARTLTGLGFKNTWIVGDGFSGGKGWLQSRLGTDSYKFSFAEVLSPSRIIPAGVRGGFGTTSRQSTQKLLPGAD* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4023 392 CDD RHOD 226 340 - -
Mtr4g4023 392 Gene3D - 219 358 IPR036873 -
Mtr4g4023 392 ProSiteProfiles Rhodanese domain profile. 232 353 IPR001763 -
Mtr4g4023 392 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 198 340 IPR036873 -
Mtr4g4023 392 PANTHER CALCIUM SENSING RECEPTOR, CHLOROPLASTIC 1 390 - -
Mtr4g4023 392 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 1 390 IPR044690 GO:0009704|GO:0071277|GO:0090333
Mtr4g4023 392 Coils Coil 275 295 - -
Mtr4g4023 392 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4023 Mtr-Chr4 54040495 54043562 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4023 7 311 Sulfurtransferasese or Rhodanese AT5G23060 69.453 9.72e-152 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4023 - - gmx:100813363 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4023 4 54040495 54043562 Mtr4g4023 4 54040495 54043562 ECH