Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3912 ATGGCAAATCCTGTTCCTGCTACCTTCTCTACTCGTGCAAACGCTCTTCTCAGGAAGAATTTAACCTTCCAGAAAAGGAACAAGAAGACCAACATTAGGCTGACTCTATTCCCATTAATCATTTGCATCATACTGGTTCTCCTTCAAAATTTAGTTGACAATCTATTGGATAAACCAAAATTCAAATGCGGCTGCGTTTGTACAACTAACCAAACTACATGTAGCGACTCCGAGAAGGTTTGTGGTGTCAAGTATTCCGATCAGACTCAAGTTTTAGCCTGTGCTATTCCTAATCCACCTGAATGGCCTCCTCTCTTGCAACTTCCGGGCAGCGAGCCATGGTATCCTCCCGTTTATACCATGCTCTTCACAGCCGACGATCACTACTTTGGACAGATTGTGTCTGACAATATATTCCCAAGTAACGTCACTATGGATTATACTGATATCATGGCTAGTTTGGCATCAAATGTGCTGGGATCTGAATCAACGCCTGACACCAACAATTTTCTTGAACCTGCTTTCACTTCGGATCTTCCCATTTATTATCTACAAACTCGTTGCCCTCTGGACAACATTGCTTTCCCAGAAATCTACCAAGAAGGCACTCCGCAGCAGGATATGGAATCATTTACTTACGAGATAGCAGGCTTTACTGTGGATCAAGAAATCAGATGTGCTGACGGTATAAATTTGTGGCGTGACAGTTCTTCTGTGATCAACAATGAGTTATATGAAGGTCATGAAGACAATCCAATAGTTTCAGCTTTTGATTTTCTAAATTCGAATGAGAATGGATTCAACGTCACTGTATGGTACAAGTCAACCAACAAGGGTGTCACTAATTTTGGTCCAACTGCATTGTTGCGAATTCCTCGTTCTATAAATTTGATATCAAATGCCTACCTGCAGTTTCTGCGTGGACTTGGTACCAAAATGTTATTTGAGTTTGTAAAGGAAATGCCAAAATCTGAGACCCCACTTAGGATTGAGATAGCTTCTCTCCTGGGCGTTCTGTTCTTTACATGGGTCGTTCTGCAACTTTTTCCGGTTGTGCTGACATCACTGATTTATGAGAAGCAACAAAAATTGAGAATCATGATGAAAATGCATGGTCTTGGTGATGGACCATATTGGATGATTACATATGGTTATTTCCTTGCCTTATCAGTGATCTACATGTTGTGCTTTGTGATATTTGGCTCAGTCCTAGGATTGAAATTCTTCACCTTGAATGACTATAGCATCCAATTTGTGTTTTATTTTATCTATATAAACTTACAAATTTCAGTGGCAATTCTGTTGGCTTCCTTTTTTTCAAATGTTAAGACTGCTACAGTAACCGCGTATATAGGTGTCTTTGGGACCGGGCTATTAGCTGGATTTCTTCTCCAATTTTTTATTCAAGATTCATCATTTCCAAGAGGATGGATCATTTGTATGGAGTTGTATCCCGGATTTGCTTTATATCGTGGGTTGTATGAGTTTGGACAGTCTGCCACCAGCGGCAGTAATATGGGGACTGTTGGTATGCGGTGGCAGGATCTGAGTGATAGCGCCAATGGCATGAAAGAGGTCTTAATTATCATGTTTGCTGAGTGGATCATAGTGCTTTTTGTTGCTTATTACATCGATCAAGTATCGTCAACAGGAAGTGGAAAAAGTACTATTTTCTTCTTGAAAGGATTTCTGAAAAAACCTCTTTCATCATGCAAGAAGCTCAGTATTCAAAGGCAGGAGTCAAATGTTTTAGCTCAGATGGAGAAACCAGATATCGTCCAAGAGAAGGAGAAGGTGGAGCAGCTGCTACTTGAACCAACTATTGATCATGCAATTGTTTGTGACGGCCTAAAAAAGTTCTATCGAGGACGGGATGGAAATCCAGGAAAATTGGCAGTGAGAGAATTGTTCCTAGCTGTGCCTCGAGGGGAATGTTTCGGTATGCTTGGTCCTAATGGGGCCGGGAAGACTTCTTTTATCAGTATGATGATTGGTCTCACAAAGCCAACATCGGGTGCGGCATATGTTCAAGGCCTGGACATAAGAACTCACATGGATGGAATATATACCAGCATGGGAGTATGCCCACAGCACAACTTGCTGTGGGAAAGTTTGACAGGTAGAGAACACCTACTTTTTTATGGTAGACTTAAAAACCTTAAAGGTTCAGTCTTGACTCAAGCAGTAGAAGAATCTTTGAAGAATTTAAACCTTTTCCATGGAGGTGTTGCTGATAAGCAAGCAGGAAAATACAGTGGAGGGATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGGGACCCCAAAGTTGTTTATATGGATGAGCCAAGCACGGGATTAGACCCTGCTTCAAGGAAATGCCTATGGAATGTTATCAGGCTTGCGAAACAGGATCGTGCAATCATTCTAACCACACATTCTATGGAAGAGGCAGAGGCTTTATGTGATCGATTAGGAATTTTTGTAAATGGTAGCTTGCAGTGTGTAGGAAATCCAAAGGAGCTGAAAGCCAGGTATGGAGGGATTTATGTGTTCACAATGACAACATCTTCCGATCACGAGAAGGATGTGGAGAACATTGTGCAACAGCTCACCCCAAATGCCAACAAGATATACCATCTCTCTGGTACTCAGAAATTTGAGCTTCCAAAAGAGGATGTTAAAATAGCAAATGTATTTCAAGCTGTTGAAGTTGCAAAAAGAAACTTTACTGTTTTCGCATGGGGTTTAGCTGACACCACATTAGAAGATGTCTTTATTAAGGTAGCACGCGAGGCTCATGCGTTTGATACCTTGTCATAA 2805 0.4121 MANPVPATFSTRANALLRKNLTFQKRNKKTNIRLTLFPLIICIILVLLQNLVDNLLDKPKFKCGCVCTTNQTTCSDSEKVCGVKYSDQTQVLACAIPNPPEWPPLLQLPGSEPWYPPVYTMLFTADDHYFGQIVSDNIFPSNVTMDYTDIMASLASNVLGSESTPDTNNFLEPAFTSDLPIYYLQTRCPLDNIAFPEIYQEGTPQQDMESFTYEIAGFTVDQEIRCADGINLWRDSSSVINNELYEGHEDNPIVSAFDFLNSNENGFNVTVWYKSTNKGVTNFGPTALLRIPRSINLISNAYLQFLRGLGTKMLFEFVKEMPKSETPLRIEIASLLGVLFFTWVVLQLFPVVLTSLIYEKQQKLRIMMKMHGLGDGPYWMITYGYFLALSVIYMLCFVIFGSVLGLKFFTLNDYSIQFVFYFIYINLQISVAILLASFFSNVKTATVTAYIGVFGTGLLAGFLLQFFIQDSSFPRGWIICMELYPGFALYRGLYEFGQSATSGSNMGTVGMRWQDLSDSANGMKEVLIIMFAEWIIVLFVAYYIDQVSSTGSGKSTIFFLKGFLKKPLSSCKKLSIQRQESNVLAQMEKPDIVQEKEKVEQLLLEPTIDHAIVCDGLKKFYRGRDGNPGKLAVRELFLAVPRGECFGMLGPNGAGKTSFISMMIGLTKPTSGAAYVQGLDIRTHMDGIYTSMGVCPQHNLLWESLTGREHLLFYGRLKNLKGSVLTQAVEESLKNLNLFHGGVADKQAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIRLAKQDRAIILTTHSMEEAEALCDRLGIFVNGSLQCVGNPKELKARYGGIYVFTMTTSSDHEKDVENIVQQLTPNANKIYHLSGTQKFELPKEDVKIANVFQAVEVAKRNFTVFAWGLADTTLEDVFIKVAREAHAFDTLS* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3912 934 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 612 849 IPR003439 GO:0005524
Mtr4g3912 934 Pfam ABC transporter 637 778 IPR003439 GO:0005524
Mtr4g3912 934 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 119 934 IPR026082 GO:0016021|GO:0055085|GO:0140359
Mtr4g3912 934 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 8 110 IPR026082 GO:0016021|GO:0055085|GO:0140359
Mtr4g3912 934 Gene3D - 604 878 IPR027417 -
Mtr4g3912 934 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 8 110 - -
Mtr4g3912 934 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 119 934 - -
Mtr4g3912 934 Pfam ABC-2 family transporter protein 330 542 - -
Mtr4g3912 934 ProSitePatterns ABC transporters family signature. 751 765 IPR017871 GO:0005524
Mtr4g3912 934 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 611 841 IPR027417 -
Mtr4g3912 934 CDD ABC_subfamily_A 616 837 - -
Mtr4g3912 934 SMART AAA_5 642 826 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3912 Mtr-Chr4 52882085 52890375 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3912 638 860 Calmodulin-binding Proteins AT2G36910 22.609 5.23e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3912 - - gmx:100805474 1348.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3912 4 52882085 52890375 Mtr4g3912 4 52882085 52890375 ECH