Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3910 ATGGTAGATCCTTCCCCTGCTAGCTTCTTTACTCAAACAAACGCTCTTCTCAGAAAGAACTTAACCTTCCAGAAACGGAACGTGAAGACCAACATCTTGTTGATTCTGTTCCCATTGATTCTTTCTGTCTTGCTTATTTCCCTTCAAAGTTTGGTCAATCATCAACTGACTCAACCCGAATCCAAATGCGGTTGTGTCTGTCGCGACAACAGTACAACATGTAACGATTCAGACAAGCTTTGTGGGGTTCAGTATTCGGATCAGACTCAAATGGCAGCCTGTGCTATTCCTCAGCCACATGAATGGCCTCCTCTCTTTCAACTTCCTCCCGTGTATTGCAAGGAAAATGTTTCCTGTGCTTTTAACATGCTTTTCACCTCCGACAATCAATCCTTTGCACAGATTTGCACAGATGTGTCAGACAATATGTTCCCAATTGAGTCCTATCCAGATGACATTGATATCATGGCTAGTTTGCCATCAAATGTGCTGGGATCTGATGCAATGCCTGGGGCCAACAATTTTCTTGAACCTGCTTTCACTTCAGATCGTCCCATTTTTTATCTACAAACTCAGTGCCCTCGGTACAACTTTGGATACTCATTTCCCTACCAGATACCAGGCAACGCCTCAGAGAAAGAAGTAGAAGTCAGATGTGGTCAAGTTATAAATTTTTGGCGTAACAGTTCCTCTGATATCGACACTGAGTTATATAAAGGTAATCAAAGAGGTAAATCAGAAGGACGGATCAATGATATAGTTTCAGCTTTTGATTTTCTAAATTCGAATGAGGATGGACTCAATGTCACTGTATGGTATAACTCAACCCGCAAGGTTGGATTGTTGCGGATTCCTCGTTCTGTCAATCTGATATCAAATGCCTATCTGAAGTTTCTGCTTGGACCTGATACCAAAATGTTATTTGAGTTTGTAAAGGAAATTCCAAAACCTGAGACCCCAATTAGACTTGAGGTAGCTTCTCTTCTGAGTGGTCTGTTCTTTACATGGGTCGTCCTGCTACTTTTTCCGGTTATTCTGACATCACTGGTTTATGAGAAGCAACAAAAATTAAGAATCATGATGAAAATGCATGGTCTTGGTGACGGGCCATATTGGATGATTTCATACGGCTATTTTCTTGCCTTATCGGTGATCTACATTTTATGTTTTGTGACGTTTGGCTCAGTCTTTGGATTAAAATTCTTCACCTTGAATGACTACAGCATCCAATTCATATTTTATTTCATCTATATAAACTTACAAATTTCAATGGCATTTCTGTTGTCTTCCTTTTATTCAAATGTTAAGACTGCTACAGTATCGTCATATATAGGCGTCTTTGGAACCGGGCTATTAGGTTCCCAGTTTTTCCAACATTTTATTCAAGTTTCATCATTTGCAAGAGAATGGATCATTTGTATGGAGTTATATCCCGGGTTTGCTTTATATCGTGGGTTATATGAGTTTGCAGAGTCTGCTACAAATGGCAGTAATTCAGGGACTAATGGTATGAGGTGGCAGGATCTGAGCGATAGCGCCAATGGCATGAAAGAGGTCTTAATTATCATGTCTTCTGAGTGGGTCGTAGTGCTTTGTGTTTCTTATTACATCGATCAAGTATTGTCTACAGGAAGTGGAAAAAGTCCTCTTTTCTTCTTGAAAGGATTTCAGAAAAAACCTCTTTCATCATTGAAGAAGCTCGCTATTCAAAGGCAGGGGTCAGAAGTTTTGGCTCAGATGGAGAAAGAAGATGTCATCCAAGAGAGGGAGAAGGTGGAGCAATTGCTTCTTGAACCAACGAATGATCATGCAATTGTTTGTGACGACCTAAAAAAATTCTATCCAGGACGGGATGGAAATCCAGGAAAATTTGCAGTGAAAGAATTGTTCCTTGCTGTGCCTCGAGGGGAATGCTTTGGTATGCTTGGTCCTAATGGTGCTGGGAAGACTTCTTTTATTAGTATGATGATTGGTCTGACAAAGCCGACATCTGGTGCGGCATATGTTCAAGGCCTGGATGTAAGAACTCATATGGACAGAATATATACTAGCATGGGAGTATGCCCACAGCATGATTTGCTGTGGGAAAGCTTGACAGGTAGAGAACACCTACTTTTTTATGGCAGACTAAAGAATCTTAAAGGTTCAGTTTTGACTCATGCAGTAGAAGAATCTTTGAAGAGTTTAAACCTTTTCTATGGAGGGGTTGCTGATAAACAATGTGGAAAATACAGTGGAGGGATGAAGAGGAGACTTAGTGTTGCAATTTCATTGATTGGGGACCCCAAAGTTGTTTATATGGATGAGCCAAGTACTGGATTAGACCCTGCTTCAAGGAAATGCCTATGGAATGTTATCAAGCTTGCGAAACAGGATCGTGCAATTATTCTGACCACACATTCTATGGAAGAGGCAGATGCTTTATGTGATCGGTTAGGAATTTTTGTAGATGGTAGCTTGCAGTGTGTAGGATATCCAAAGGAGCTGAAAGGCAGATATGGAGGAACATATGTGTTCGCAATGACAACATCTTCTGATCACGAGAAGGATGTCGAGAACATGGTACAACGGCTCACCCCAAATGCCAACAAGATATACCATCTCTCTGGTACTCAAAAATTTGAGCTGCCAAAAGAGGAAATTAAAATGGCGAATGTATTCCGAGCTATTGAAGCTGCAAAAAGAAACTTCACTGTTTTCGCATGGGGTTTATCTGACACCACATTAGAAGACGTCTTCATTAAGGTAGCACGCGAGGCTCAAGCATTTGATACCTTGACATAG 2784 0.408 MVDPSPASFFTQTNALLRKNLTFQKRNVKTNILLILFPLILSVLLISLQSLVNHQLTQPESKCGCVCRDNSTTCNDSDKLCGVQYSDQTQMAACAIPQPHEWPPLFQLPPVYCKENVSCAFNMLFTSDNQSFAQICTDVSDNMFPIESYPDDIDIMASLPSNVLGSDAMPGANNFLEPAFTSDRPIFYLQTQCPRYNFGYSFPYQIPGNASEKEVEVRCGQVINFWRNSSSDIDTELYKGNQRGKSEGRINDIVSAFDFLNSNEDGLNVTVWYNSTRKVGLLRIPRSVNLISNAYLKFLLGPDTKMLFEFVKEIPKPETPIRLEVASLLSGLFFTWVVLLLFPVILTSLVYEKQQKLRIMMKMHGLGDGPYWMISYGYFLALSVIYILCFVTFGSVFGLKFFTLNDYSIQFIFYFIYINLQISMAFLLSSFYSNVKTATVSSYIGVFGTGLLGSQFFQHFIQVSSFAREWIICMELYPGFALYRGLYEFAESATNGSNSGTNGMRWQDLSDSANGMKEVLIIMSSEWVVVLCVSYYIDQVLSTGSGKSPLFFLKGFQKKPLSSLKKLAIQRQGSEVLAQMEKEDVIQEREKVEQLLLEPTNDHAIVCDDLKKFYPGRDGNPGKFAVKELFLAVPRGECFGMLGPNGAGKTSFISMMIGLTKPTSGAAYVQGLDVRTHMDRIYTSMGVCPQHDLLWESLTGREHLLFYGRLKNLKGSVLTHAVEESLKSLNLFYGGVADKQCGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIKLAKQDRAIILTTHSMEEADALCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMTTSSDHEKDVENMVQRLTPNANKIYHLSGTQKFELPKEEIKMANVFRAIEAAKRNFTVFAWGLSDTTLEDVFIKVAREAQAFDTLT* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3910 927 SMART AAA_5 635 818 IPR003593 -
Mtr4g3910 927 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 7 926 - -
Mtr4g3910 927 CDD ABC_subfamily_A 609 830 - -
Mtr4g3910 927 Pfam ABC-2 family transporter protein 324 535 - -
Mtr4g3910 927 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 7 926 IPR026082 GO:0016021|GO:0055085|GO:0140359
Mtr4g3910 927 ProSitePatterns ABC transporters family signature. 744 758 IPR017871 GO:0005524
Mtr4g3910 927 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 605 842 IPR003439 GO:0005524
Mtr4g3910 927 Pfam ABC transporter 628 771 IPR003439 GO:0005524
Mtr4g3910 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 604 833 IPR027417 -
Mtr4g3910 927 Gene3D - 594 871 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3910 Mtr-Chr4 52833305 52841358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3910 614 853 Calmodulin-binding Proteins AT2G36910 23.887 3.48e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3910 - - gmx:100806425 1299.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3910 4 52833305 52841358 Mtr4g3910 4 52833305 52841358 ECH