Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3880 ATGAAAATCACCATTGTTGCTTGTACTTTCTTACTGGTTTTCACAACACTTTTCAACTCTTCTTCTCTTGCTCTAACTCAAGATGGTCAAACATTGTTGGAGATCAAAAGTACTTTGAATGATACCAAAAATGTTCTTAGCAACTGGCAAGAGTTTGATGCTTCTCATTGTGCATGGACTGGAATCTCATGTCATCCTGGTGATGAACAAAGAGTTCGCTCAATTAATCTACCATATATGCAGCTTGGAGGGATAATATCTCCCAGCATTGGTAAACTAAGTAGACTTCAGAGATTGGCATTTCATCAGAATGGCTTGCATGGAATCATTCCTACTGAAATTACCAATTGTACTGAGCTTAGAGCCCTGTACTTGAGGGCTAATTATTTTCAAGGAGGCATACCATCAGGCATTGGAAATCTTTCATTTTTAAATATACTGGATGTATCAAGCAATTCATTAAAAGGAGCTATACCTTCCTCTATTGGCCGTCTCTCACATTTGCAAGTTCTGAACCTGTCAACCAATTTCTTTTCTGGTGAAATACCTGATATTGGAGTCCTGAGCACCTTCCAAAAGAACTCGTTTATTGGCAATTTAGATCTTTGTGGAAGGCAAATTGAAAAGCCATGTCGAACATCACTCGGTTTCCCTGTGGTGATACCACACGCCGAAAGTGATGAAGCTGCAGTCCCTCCAAAAAAATCTTCACAATCACATTACTTGAAGGCTGTGCTAATTGGGGCAGTGGCAACTTTGGGCCTTGCACTTATCATAACCCTTTCATTACTCTGGGTTCGTTTGTCGTCAAAGAAGGAAAGAGCTGTTAGGAAATACACAGAAGTCAAGAAGCAAGTTGATCCATCAGCAAGTGCTAAACTTATTACCTTCCATGGCGATATGCCATACACGTCATCTGAAATCATTGAAAAGCTGGAGTCTCTTGACGAAGAGGATATAGTTGGGTCAGGTGGATTTGGTACTGTTTACCGAATGGTGATGAATGATTGTGGTACATTTGCTGTTAAGCGAATTGACCGAAGCCGCGAAGGATCTGATCAAGTGTTTGAAAGGGAACTTGAGATTTTGGGGAGCATCAAGCACATAAATTTAGTAAACTTACGCGGTTACTGCAGGCTTCCTACTTCAAGGCTCCTTATCTATGATTATGTGGCCTTAGGAAGCTTAGATGATCTCTTGCATGAAAATACTGAGCGACAACCCTTGAATTGGAACGATCGGCTAAAGATAACCCTCGGTTCTGCCCGGGGTTTGGCATACTTACACCATGAGTGCTGCCCAAAAATCGTGCATCGTGACATAAAATCTAGCAACATCCTTCTTAATGAAAATATGGAGCCTCACATCTCTGATTTTGGTCTTGCAAAGCTCTTGGTTGATGAAGATGCACATGTTACCACTGTGGTTGCTGGTACATTTGGCTATTTGGCACCAGAGTATCTACAAAGTGGGAGAGCCACTGAGAAGTCAGATGTATATAGCTTTGGAGTTCTATTACTCGAACTTGTAACCGGGAAAAGGCCTACAGATCCTTCCTTTGTAAAGAGAGGTTTAAATGTTGTTGGTTGGATGAACACATTGTTGAAAGAAAACAGATTGGAAGACGTCGTAGACAGAAAGTGCAGTGACGTAAATGCTGAAACTCTTGAAGTAATTTTAGAGCTAGCGGCAAGATGTACCGATTCAAATGCAGATGATCGACCTTCGATGAATCAAGTATTGCAGTTGCTGGAGCAAGAGGTCATGTCGCCTTGTCCAAGTGAATTTTACGAGTCCCATTCAGATCACTGA 1812 0.4134 MKITIVACTFLLVFTTLFNSSSLALTQDGQTLLEIKSTLNDTKNVLSNWQEFDASHCAWTGISCHPGDEQRVRSINLPYMQLGGIISPSIGKLSRLQRLAFHQNGLHGIIPTEITNCTELRALYLRANYFQGGIPSGIGNLSFLNILDVSSNSLKGAIPSSIGRLSHLQVLNLSTNFFSGEIPDIGVLSTFQKNSFIGNLDLCGRQIEKPCRTSLGFPVVIPHAESDEAAVPPKKSSQSHYLKAVLIGAVATLGLALIITLSLLWVRLSSKKERAVRKYTEVKKQVDPSASAKLITFHGDMPYTSSEIIEKLESLDEEDIVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPTSRLLIYDYVALGSLDDLLHENTERQPLNWNDRLKITLGSARGLAYLHHECCPKIVHRDIKSSNILLNENMEPHISDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFVKRGLNVVGWMNTLLKENRLEDVVDRKCSDVNAETLEVILELAARCTDSNADDRPSMNQVLQLLEQEVMSPCPSEFYESHSDH* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3880 603 Gene3D Transferase(Phosphotransferase) domain 1 392 594 - -
Mtr4g3880 603 ProSiteProfiles Protein kinase domain profile. 315 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3880 603 PANTHER RECEPTOR-LIKE PROTEIN 55 2 603 - -
Mtr4g3880 603 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Mtr4g3880 603 Gene3D Phosphorylase Kinase; domain 1 274 390 - -
Mtr4g3880 603 SUPERFAMILY L domain-like 25 211 - -
Mtr4g3880 603 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Mtr4g3880 603 Gene3D Ribonuclease Inhibitor 25 213 IPR032675 -
Mtr4g3880 603 Pfam Protein kinase domain 317 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3880 603 SMART serkin_6 315 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3880 603 SUPERFAMILY Protein kinase-like (PK-like) 297 585 IPR011009 -
Mtr4g3880 603 PANTHER LRR RECEPTOR-LIKE KINASE 2 603 - -
Mtr4g3880 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3880 Mtr-Chr4 52567417 52571503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3880 10 593 Receptor kinase-like Gene Family AT2G35620 49.231 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Mtr4g3880 Pkinase 2.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3880 - - gmx:100803920 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3880 4 52567417 52571503 Mtr4g3880 4 52567417 52571503 ECH