Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3859 ATGGCTTCCTCCAATCTCACCAACCTCACCATTCCTCCAATTTCATCTTCTTCTCGTCCCTTCAACGATTCCAACCCCACCAGCCCACAAGTCATACACAGTAGGTCCCACTCCTTCGTCGGTCCCTCCCCTCGCTTCCCTCCTCCACCCTCCGACAACAACAACTCTCTCTTCTTCCTCGACGAACTCACTTCCAACAGCGACGAAGAAGAAGAAAACGAAGAAATTCAACAACCCCTCCAACACAAATTCGGACCCGCAGATTTCCAAATTCTCAGAGTTGTAGGACAAGGTGCCTTTGGCAAAGTCTTCATGGTCAGAAAAAAAGGTGGAGATTCAAATTCAAATTCTTCAAACGGAATATTCGCCATGAAGGTTATGAGAAAAGACAACATCATTAAGAAAAATCATGTTGATTATATGAAAGCTGAGAGAGATATTCTTACTAAAGTTCTTCATCCTTTCATTGTTCCTCTTCGCTACTCTTTCCAAACTAAATCTAAATTATATTTGATTTTGGACTTTATAAATGGTGGCCATCTTTTCTTTCATTTATGTCGACAAGGCATTTTTAGTGAGGATGAGGCAAGGATTTACACTGCTGAGATTGTATCTGCTGTTTCACATCTTCACAGTAAAGGCATTGTGCATCGAGATCTTAAACCCGAAAACATACTCATGGATTCTCATGGCCATGTGATGTTAACTGATTTTGGAATGTCGAAAGAGATTGAGGAATCTCAGAGATCTAACTCTATGTGTGGGACTACTGAATATATGGCCCCGGAAATCCTTCTTGGTAAAGGACATAACAAGGATGCGGATTGGTGGAGTGTTGGTGCGCTCTTGTATGAAATGATAACGGGGAAGGCACCATTTACACATACAAACAGAAAGAAACTGCAGGAGAAAATTATTAAAGAGAAAGTTAAATTTCCACCGTACCTTACCAGTGACGCTCATTCTTTGCTCAAAGGATTGCTGCAAAAGGATCCATCGACAAGGTTAGGCAGTGGGCCAAATGGAGATGAGCAGATAAAAAATCATAAATGGTTTAAGTCGATCAATTGGACCAAATTGGAGGCAAGAGAAGTGCAGCCCAAGTTTAAACCAGCTGATGTGGCTGGAAAAGAGTGCACGGCTAATTTTGATCGATGCTGGACAACAATGCCTCTCGAGGACTCACCAGCATCAACTCCTACAGCAGGTGACCATTTTCAGGGCTATACTTATGTGGCACCGAATCCTTGGCTTTCTTCTAGATAA 1266 0.4226 MASSNLTNLTIPPISSSSRPFNDSNPTSPQVIHSRSHSFVGPSPRFPPPPSDNNNSLFFLDELTSNSDEEEENEEIQQPLQHKFGPADFQILRVVGQGAFGKVFMVRKKGGDSNSNSSNGIFAMKVMRKDNIIKKNHVDYMKAERDILTKVLHPFIVPLRYSFQTKSKLYLILDFINGGHLFFHLCRQGIFSEDEARIYTAEIVSAVSHLHSKGIVHRDLKPENILMDSHGHVMLTDFGMSKEIEESQRSNSMCGTTEYMAPEILLGKGHNKDADWWSVGALLYEMITGKAPFTHTNRKKLQEKIIKEKVKFPPYLTSDAHSLLKGLLQKDPSTRLGSGPNGDEQIKNHKWFKSINWTKLEAREVQPKFKPADVAGKECTANFDRCWTTMPLEDSPASTPTAGDHFQGYTYVAPNPWLSSR* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3859 421 ProSiteProfiles AGC-kinase C-terminal domain profile. 353 421 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mtr4g3859 421 ProSiteProfiles Protein kinase domain profile. 89 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3859 421 MobiDBLite consensus disorder prediction 1 37 - -
Mtr4g3859 421 ProSitePatterns Protein kinases ATP-binding region signature. 95 125 IPR017441 GO:0005524
Mtr4g3859 421 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 22 420 - -
Mtr4g3859 421 SMART pkinase_C_6 353 413 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mtr4g3859 421 Pfam Protein kinase C terminal domain 374 411 IPR017892 GO:0004674|GO:0005524|GO:0006468
Mtr4g3859 421 SUPERFAMILY Protein kinase-like (PK-like) 77 375 IPR011009 -
Mtr4g3859 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Mtr4g3859 421 Pfam Protein kinase domain 89 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3859 421 SMART serkin_6 89 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3859 421 MobiDBLite consensus disorder prediction 1 58 - -
Mtr4g3859 421 PANTHER RIBOSOMAL PROTEIN S6 KINASE 22 420 - -
Mtr4g3859 421 Gene3D Phosphorylase Kinase; domain 1 87 396 - -
Mtr4g3859 421 Gene3D Transferase(Phosphotransferase) domain 1 176 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3859 Mtr-Chr4 52306175 52309328 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3859 29 414 AGC Kinase Gene Family AT3G08720 60.391 1.32e-175 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Mtr4g3859 Pkinase 1.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3859 K04688 - gmx:100798259 610.527