Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3838 ATGTCGCTCAAGAGGGGTCCCGATGATAACAAGACTCCAGATGATAAACGTAGAAAGCCTCCTCCTTTTTCCAGTGTGGTGCGCGAAGTGATGAAGTTACAATCAGTTAGGAATTTGATGGAGCCAATTCTAGAGCCCTTGGTTCGCAGAGTGGTTAGAGAGGAAGTTGAATTGGCTCTAAAGAAGCATTTGAGCAGCATTAAACAGACCTGTGGAAAGGAGATGAATACTTCAGAATCAAGAACTTTGCAGCTGCAGTTTGAAAACAGCATATCTCTCCCTGTCTTTACAGGAGCTCGAATTGAAGGAGAAGATGGCTCAAACTTAAGGATACGTTTAGTTGACGCCTTAACAGGGAAGGTTGTTTGTACAGGACCTGAATCTTCAGCTAAGGTGGAAATTGTAGTTCTTGAGGGTGATTTTGAAGAAGAAAGTGACATTTGGATGCCTGAAGATTTCAAGAACAATATTGTGAGAGAGAGGGATGGAAAAAAGCCCCTCCTTACAGGAGATGTGATTTTATATCTAAAAGACGGGCTTTGTATGGTGGGTGAAATTTCATATACCGATAATTCAAGTTGGACAAGGAGTCGTAGGTTCAGGCTTGGGGTAAGAGTTGTGGACAACTTTGACGGTATTAGAATAAGAGAAGCAAAGACAGATTCATTTATTGTTAGGGATCACAGAGGAGAATTGTACAAGAAACACCACCCTCCAAGTCTGTCGGATGAAGTTTGGAGACTGGAAAAGATAGGCAAAGATGGAGCTTTCCACAGGCGTTTGAGTCGTGAAAAGATACGTACTGTTAAAGATTTTCTCACACTACTAAATCTCGATCCAGCGAAGCTGCGAACAATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACCGTAGAGCATGCTCGGACTTGTGTTCTTGATACAACACGACACGTATCGTTCGCTTCTCATTCTCAACAACCTCACGTAGTCTTCAATGCCGTGGGAGAAGTGACAGGACTGCTCGCTGAAAGTGAGTATGTCGCTGTAGATAAGCTGTCCGAAACCGAAAAGGCTGATGCTCAAATCTCGGTTATTTCTGCACTCAACCAATGCGATTTTGCCTCTTTTGAAGATGAGGTCTCCCTAATGGATGGTTATTCACATTTAACTAATGTTCATTACTCCCCAAGCTCTCCGAGAACCGAGGGATCGAGCGCCAACAAGCTTTTGGCTCTTCAAAAGACCGGAGGATTCAACTATACACAAGAAAGCGCGTCTTCTACCGATATCATGCCATCCATTTACTCAGTTGGTGGAACTAGTAGCTTGGACGACTATGGCTTGCCTAATTTCGAAAGCCTCGGCCTTAGATACGATCAACATCTTGGTTTTCCCGTCCAAGTCTCCAACTCTTTGATCTGTGACATGGATTCAATAGTCCATGCTTTTGGCGATGAAGATCATCTGCAATTTTTCGATGCGGATCTTCAATCTCAGTGCCATATTGAAGCAGATTTACATAGTGCTGTTGATAGCTTCATGCCGGTATCTTCTACATCTATGACTAAGGGAAAAGCTCAGAGGAGATGGAGAAAGGTAGTCAACGTTCTGAAATGGTTCATGGTGAAGAAACGAAGAAACCAATTATATAGGTAA 1644 0.4325 MSLKRGPDDNKTPDDKRRKPPPFSSVVREVMKLQSVRNLMEPILEPLVRRVVREEVELALKKHLSSIKQTCGKEMNTSESRTLQLQFENSISLPVFTGARIEGEDGSNLRIRLVDALTGKVVCTGPESSAKVEIVVLEGDFEEESDIWMPEDFKNNIVRERDGKKPLLTGDVILYLKDGLCMVGEISYTDNSSWTRSRRFRLGVRVVDNFDGIRIREAKTDSFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHRRLSREKIRTVKDFLTLLNLDPAKLRTILGTGMSAKMWEVTVEHARTCVLDTTRHVSFASHSQQPHVVFNAVGEVTGLLAESEYVAVDKLSETEKADAQISVISALNQCDFASFEDEVSLMDGYSHLTNVHYSPSSPRTEGSSANKLLALQKTGGFNYTQESASSTDIMPSIYSVGGTSSLDDYGLPNFESLGLRYDQHLGFPVQVSNSLICDMDSIVHAFGDEDHLQFFDADLQSQCHIEADLHSAVDSFMPVSSTSMTKGKAQRRWRKVVNVLKWFMVKKRRNQLYR* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3838 547 MobiDBLite consensus disorder prediction 1 24 - -
Mtr4g3838 547 Pfam Calmodulin binding protein central domain 240 306 IPR046830 -
Mtr4g3838 547 Pfam Calmodulin binding protein C-terminal domain 319 367 IPR046829 -
Mtr4g3838 547 MobiDBLite consensus disorder prediction 1 23 - -
Mtr4g3838 547 PANTHER CALMODULIN-BINDING PROTEIN 60 A 9 541 - -
Mtr4g3838 547 Pfam Calmodulin binding protein-like N-terminal domain 83 228 IPR046831 -
Mtr4g3838 547 PANTHER OS02G0177800 PROTEIN 9 541 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3838 Mtr-Chr4 52064121 52068383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3838 5 354 Calmodulin-binding Proteins AT5G62570 61.538 1.47e-154 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3838 - - gmx:100793156 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3838 4 52064121 52068383 Mtr4g3838 4 52064121 52068383 ECH