Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3833 ATGGAAGTGAAACGGTATTTGTTGGAATGTATTCCATTTGCAGCAATGGTGATTGTAGAGTGTCTTGATGTTGGATTGACCACATTGAGTAAAGAAGCCATGTCCACAAAAGGAATGAACCACTTCATCTTTGTTCTCTATTCCAATGCTCTTGCCACTTTCATTCTCCTCCCTTCCTATTTCCTCATCAACAGGACAACAAGACCACCCCTTTCTTTCTCACTTCTTGCCAAATTTTTCTTCCTCGGCCTTGTCGGCATAACTATCATGCAGAATTGTGTATTCACTGGCATAAGCTACAGCTCTCCCACCCTTGGATCTGCTATGAGCAACTTGACTCCGGCGATCACTTTTGTTCTAGCAGTCATCTTCAGGATGGAGAAGTTGGATGCTGGAAGCTCAATAAGCCAGATCAAAATTGTGGGGACTGTGGTGTCTATCTCAGGAGCTTTAATAGTGACCTTTTACAAGGGTGCTCCCATTAGTAGCATTCAAACTCAACCCTCTACATCGCAACCATTCTGGTCTCTATTAGCAGAAACCAGTAACTGGGTCATTGGGGGTCTCTTCCTAGCCACTGCCTCTTTATCTCTTGCAATATGGAATATTGCTCAGGCAGAAATTCTTAGAGGGTATCCATCTCAATTGACCATAGTAGCATTCTACTGCTTATTTGGAACCATCCAATGTGCACTACTTTCCCTCATTGTAGTCAAAGATCCAAATGCCTGGAATCTAAGTCTTGACATTGAGTTAATCGCTATAATCTATTCAGCTATTTTCGGAAGTGCAGTGACATTTTCTGTATTGACTTGGTGCATAGATAGGAAAGGACCTGTATTTGTTACCATGTTCAAGCCTGTTGGGATTGCCATTGCTGCCTTTATGAGTGTTGCCTTCCTTGGTGAAACACTTCATGTTGGAAGTGTGATCGGAGCACTAGTAATCGCCATCGGATTTTACACAGTAATGTGGGCACAATCTAAAGAGAAAAATGTGAAAGGCCTTGAAGTTGATAGATTGCCATCATCCTCGTCTGCCCCACTACTAGAGTCTACGTGA 1062 0.4275 MEVKRYLLECIPFAAMVIVECLDVGLTTLSKEAMSTKGMNHFIFVLYSNALATFILLPSYFLINRTTRPPLSFSLLAKFFFLGLVGITIMQNCVFTGISYSSPTLGSAMSNLTPAITFVLAVIFRMEKLDAGSSISQIKIVGTVVSISGALIVTFYKGAPISSIQTQPSTSQPFWSLLAETSNWVIGGLFLATASLSLAIWNIAQAEILRGYPSQLTIVAFYCLFGTIQCALLSLIVVKDPNAWNLSLDIELIAIIYSAIFGSAVTFSVLTWCIDRKGPVFVTMFKPVGIAIAAFMSVAFLGETLHVGSVIGALVIAIGFYTVMWAQSKEKNVKGLEVDRLPSSSSAPLLEST* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3833 353 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020|GO:0016021
Mtr4g3833 353 Pfam EamA-like transporter family 27 154 IPR000620 GO:0016020|GO:0016021
Mtr4g3833 353 PANTHER WAT1-RELATED PROTEIN 8 348 - -
Mtr4g3833 353 PANTHER WAT1-RELATED PROTEIN 8 348 IPR030184 GO:0016021|GO:0022857
Mtr4g3833 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 329 - -
Mtr4g3833 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3833 Mtr-Chr4 52014243 52016522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3833 1 352 Nodulin-like Gene Family AT3G28050 44.054 6.02e-88 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3833 - - ccaj:109809148 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1436 5 15119515 15123054 Mtr4g3833 4 52014243 52016522 ECH
Mtr4g3833 4 52014243 52016522 Mtr4g3833 4 52014243 52016522 ECH