Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3825 ATGGCAGCTCGCACACTTTCTCGTTTGCTCTCTCGCTCCCTATCTTCTTCTTCTTCTTCTTCTGGAGCTTCTGCTTCTCTGCTTCGCTCACCGCTTGGAAGAAAATCTGAAGGGTTGATAAACACAAACAGATTTAGCACTGCTGCAGCTGTTCAGGAATTGATTACTCCACAAGTTTCAATAAATTATACACAGCATCTTATAAATGGAAAGTTTGTGGATGCTGCATCAGGGAAAACATTTCCAACACTTGATCCACGCACAGGGGAAGTGATTGCTCATGTTGCTGAAGGTGATGCTGAAGATATTAACCGTGCAGTTTCAGCAGCTCGTGAGGCCTTTGATAATGGACCTTGGCCTAAAATGAGTGCTTATGAAAGATGTCGTATATTGTTGCGATTTGCTGATTTGGTTGAGAAGCACAATGATGAGATTGCAGCTCTGGAGGCATGGAACAATGGAAAGCTTTATGAACAGGCTGCCAAAGCTGAAGTACCTATGTTTGTGCGTTTATTTCGCTACTATGCTGGTTGGGCAGATAAAATTCATGGGCTGACAGTCCCGGCTGATGGAGATTATCATGTCCAGACATTGCATGAACCAATTGGTGTAGCAGGACAAATTATACCTTGGAATTTTCCTCTACTTATGTTTGCTTGGAAAGTTGGACCAGCTCTAGCATGTGGTAATACCATTGTCCTCAAGACTGCTGAGCAAACACCGCTAACGGCTCTACTTGTGGCAAAACTACTTCATGAGGCCGGTCTACCCCCAGGTGTTCTGAATATAGTTTCTGGCTATGGTCCAACTGCTGGTGCATCTCTTGCAAGTCATATGGACGTGGACAAGTTAGCGTTCACTGGATCAACAGACACTGGAAAAACTGTACTTGAGCTGGCTGCAAGAAGCAATCTTAAGCCAGTGACATTAGAACTTGGAGGGAAATCGCCATTCATTGTTTGTGAGGATGCTGATATTGACAAAGCTGTTGAAATTGCTCACTTTGCTCTTTTCTTTAATCAGGGACAATGTTGCTGTGCTGGATCCCGTACCTTCGTACATGAGCGTATCTATGACGAGTTCTTGGAGAAATCAAAGGAACGAGCTTTGAGACGTGTTGTTGGTGATCCATTTAAGAAGGGTGTAGAGCAAGGTCCTCAGATTGATTCGAAACAATTTGAGAAAGTACTTAGGTATATAAAGTCTGGAATTGATAGCAATGCTACACTTGAATGTGGAGGTGGGAGATTGGGTTCCAAAGGCTTCTTTGTCCAGCCAACTGTATTTTCAAATGTTCAGGATGATATGTTGATAGCTAAAGATGAAATATTTGGCCCAGTTCAGACCATCTTGAAGTTCAAGGACATTAATGAAGTGATACGACGGGCAAATGCGACACGTTATGGTTTAGCAGCAGGTGTTTTCACAAACAACGTGAGCACAGCCAACACTTTGATGCGGGCACTGAGAGCTGGAACAGTGTGGATTAATTGCTTTGATGTGTTTGATGCTGCAATTCCTTTTGGTGGTTACAAGATGAGTGGGATTGGCAGGGAGAAAGGAATATACAGTCTTCACAACTATCTGCAGGTAAAAGCTGTGGTGTCCCCACTAAACAATCCTGCGTGGTTGTAA 1635 0.4349 MAARTLSRLLSRSLSSSSSSSGASASLLRSPLGRKSEGLINTNRFSTAAAVQELITPQVSINYTQHLINGKFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVSAAREAFDNGPWPKMSAYERCRILLRFADLVEKHNDEIAALEAWNNGKLYEQAAKAEVPMFVRLFRYYAGWADKIHGLTVPADGDYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTALLVAKLLHEAGLPPGVLNIVSGYGPTAGASLASHMDVDKLAFTGSTDTGKTVLELAARSNLKPVTLELGGKSPFIVCEDADIDKAVEIAHFALFFNQGQCCCAGSRTFVHERIYDEFLEKSKERALRRVVGDPFKKGVEQGPQIDSKQFEKVLRYIKSGIDSNATLECGGGRLGSKGFFVQPTVFSNVQDDMLIAKDEIFGPVQTILKFKDINEVIRRANATRYGLAAGVFTNNVSTANTLMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVSPLNNPAWL* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3825 544 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 316 505 IPR016163 GO:0016620
Mtr4g3825 544 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 33 544 - -
Mtr4g3825 544 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 310 317 IPR029510 GO:0016491
Mtr4g3825 544 CDD ALDH_F2BC 61 535 - -
Mtr4g3825 544 Pfam Aldehyde dehydrogenase family 72 534 IPR015590 GO:0016491
Mtr4g3825 544 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 33 544 - -
Mtr4g3825 544 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 78 534 IPR016162 GO:0016491
Mtr4g3825 544 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 338 349 IPR016160 GO:0016491
Mtr4g3825 544 SUPERFAMILY ALDH-like 58 538 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3825 Mtr-Chr4 51970802 51974677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3825 1 544 Aldehyde Dehydrogenase Gene Family AT3G48000 78.165 0.0 896
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3825 K00128 - gmx:100811501 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3825 4 51970802 51974677 Mtr3g2477 3 38699499 38703551 ECH
Mtr8g3729 8 47757976 47761864 Mtr4g3825 4 51970802 51974677 ECH
Mtr4g3825 4 51970802 51974677 Mtr4g3825 4 51970802 51974677 ECH