Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3822 ATGAAGGAAACCAGTGATGGGTTTGTAAGAGCAGATCAGATTGATCTGAAAAGCATCGATGAACAGCTTGAAAGACATCTCAACAAGGTGTTGACTATTGACAAGAAGAAGCGCGTTGAAGAAGAAGATTCTTCTGCTGCTTCTGCTTCTGTTTTTGATCATGTTCGTGTTCACACCAGCAGTGCAAATACTTCTCCTACATCTATTAAGTTCAAAACTAACTTCAAGAAGCAAAAACAGGATTGGGAAATTGATCCTTCTAAACTCATCATCAAAAGTGTTATTGCTCGTGGCACTTTTGGCACTGTTCATCGTGGTGTTTATGATACTCAAGATGTTGCTGTTAAATTGCTTGACTGGGGTGAAGAAGGTCAAAGGACAGAAGCTGAGGTTTCCTCCCTGAGGGCAGCGTTTATACAGGAAGTTGCTGTTTGGCATAAACTTGATCATCCCAATGTCACAAAGTTTATTGGAGCAACTATGGGATCTGCAGAATTGCAGATTCAAACTGATACTGGTCTAATTGGCATGCCAAGCAATATCTGTTGTGTTGTTGTGGAGTATCTTGCTGGAGGTACACTGAAATCATACCTAATAAAGAACAGGAGGAGGAAATTAGCTTTTAAGGTTGTCATACAGCTGGTGCTTGATTTAGCAAGAGGGTTGAGTTATCTTCACTCTCAGAAGATTGTTCACAGAGATGTGAAGACCGAAAACATGCTGCTGGATAAGACCCGCACAGTTAAAATTGCTGATTTTGGGGTTGCACGAGTCGAGGCGTCAAATCCTAATGATATGACCGGGGAGACCGGAACCCTTGGTTATATGGCTCCAGAGGTTTTAAATGGAAACCCCTATAACAGGAAATGTGATGTGTACAGTTTTGGTATCTGTTTATGGGAGACATATTGTTGTGACATGCCATATCCTGACCTAAGTTTCTCAGAGATTACTTCAGCTGTTGTTCGCCAGAATTTGAGACCAGAAATACCAAGATGCTGCCCAAGTTCTCTTGCAAACGTAATGAGGAAATGCTGGGATGCCAGTCCTGATAAGCGGCCAGAGATGGATGAGGTAGTTACCATGCTGGAGGCCATTGACACATCCAAAGGTGGAGGTATGATCCCTATTGATCAGCAGCAGGGTTGTTTTTGCTTTCGCAAGCATAGAGGACCATGA 1179 0.4258 MKETSDGFVRADQIDLKSIDEQLERHLNKVLTIDKKKRVEEEDSSAASASVFDHVRVHTSSANTSPTSIKFKTNFKKQKQDWEIDPSKLIIKSVIARGTFGTVHRGVYDTQDVAVKLLDWGEEGQRTEAEVSSLRAAFIQEVAVWHKLDHPNVTKFIGATMGSAELQIQTDTGLIGMPSNICCVVVEYLAGGTLKSYLIKNRRRKLAFKVVIQLVLDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWETYCCDMPYPDLSFSEITSAVVRQNLRPEIPRCCPSSLANVMRKCWDASPDKRPEMDEVVTMLEAIDTSKGGGMIPIDQQQGCFCFRKHRGP* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3822 392 Gene3D Phosphorylase Kinase; domain 1 69 172 - -
Mtr4g3822 392 SMART serkin_6 89 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3822 392 ProSiteProfiles Protein kinase domain profile. 89 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3822 392 CDD STKc_MAP3K-like 95 363 - -
Mtr4g3822 392 PIRSF ILK 17 372 - -
Mtr4g3822 392 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 386 - -
Mtr4g3822 392 Gene3D Transferase(Phosphotransferase) domain 1 190 381 - -
Mtr4g3822 392 SUPERFAMILY Protein kinase-like (PK-like) 61 363 IPR011009 -
Mtr4g3822 392 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 386 - -
Mtr4g3822 392 Pfam Protein tyrosine and serine/threonine kinase 91 363 IPR001245 GO:0004672|GO:0006468
Mtr4g3822 392 PRINTS Tyrosine kinase catalytic domain signature 186 199 IPR001245 GO:0004672|GO:0006468
Mtr4g3822 392 PRINTS Tyrosine kinase catalytic domain signature 224 242 IPR001245 GO:0004672|GO:0006468
Mtr4g3822 392 PRINTS Tyrosine kinase catalytic domain signature 290 312 IPR001245 GO:0004672|GO:0006468
Mtr4g3822 392 PRINTS Tyrosine kinase catalytic domain signature 334 356 IPR001245 GO:0004672|GO:0006468
Mtr4g3822 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3822 Mtr-Chr4 51943924 51949474 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3822 1 324 MAP Kinase Kinase Kinase AT5G50000 77.607 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mtr4g3822 PK_Tyr_Ser-Thr 3.7e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3822 - - gmx:100807921 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3822 4 51943924 51949474 Mtr3g2473 3 38679409 38682664 ECH
Mtr4g3822 4 51943924 51949474 Mtr4g3822 4 51943924 51949474 ECH