Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3807 ATGCAGGCTACACTTTTACCTCTCTCCCCTTCTTTCTCTCTCTACAAATCTCGCTCCTCTCTCTCCTCTTCTCCTTCTCTCTCTACCTCTTCTTTCTCATCATGGACACCTCTCGTTTCTTCTCATTCTTCTTCAAAATTAATCTCTCTAACACCCCTTCATTCCTCTACCCGCTTCCAAACCAAAGCAACCACCACCATCGACGCCGCCGACTCCTCCGACAGCAGTAGTCCTCTATTCAAAGCTCTAGAGCTTGGAGTTCTTTTTTGCCTCTGGTTCTCCTTTAACATCTACTTTAACATCTACAACAAACAGGTCTTGAAGGTTTACCATTTACCAGTAACTCTCACTGCTTTTCAATTTGCTATTGGCACACTCCTTGTAGCATTCATGTGGGGTCTTAATCTTTATAAAAGGCCAAAACTCACTTCTTCACAGCTTTTAGCAATATTTCCTTTGGCTTTGGTACATACATTAGGGAATCTTTTCACTAACATGAGTCTTGGAAAGGTTGCTGTCTCTTTTACTCATACTGTTAAATCAATGGAGCCTTTCTTTTCTGTCCTTCTGTCTTCTACGTTCCTTGGAGAGATGCCTACAGCATGGGTGGTTGCTTCCCTTGTGCCAATTGCTGGTGGAGTGGCGCTGGCGTCTGCTACAGAGGTCTCTTTCAATTGGGTTGGATTTTTGAGTGCTATGGCTTCCAATTTGACGAATCAATCTCGTAATGTTCTTAGCAAAAAACTCATGGTTAACAAGGAGGAATCCATGGACAACATAACCCTCTTCTCAGTAATAACAGTCATGTCATTCTTCCTATCAGTACCTATAGCCCTCTTCATGGAGGGTGTTAAATTTACCCCTGCTTACCTGCAATCTACAGGATTAGATGTTCAACAAGTGTACATTAGATCTCTTCTTGCTGCGCTTTGTTACCATGCGTATCAGCAAGTTTCTTATATGATATTGGAGAGAGTATCACCTGTTACTCATTCTGTAGCAAACTGTCTGAAGCGTGTGATAGTTATAGTGAGCTCTGTCATATTTTTCCAAACACCTGTCTCACCAATTAACGCATTAGGAACTGGTATAGCTCTTTCTGGTGTTTTCCTATATTCCAGGGCGAAGAGAATTAAGCCAAAGACAGATTAA 1152 0.4193 MQATLLPLSPSFSLYKSRSSLSSSPSLSTSSFSSWTPLVSSHSSSKLISLTPLHSSTRFQTKATTTIDAADSSDSSSPLFKALELGVLFCLWFSFNIYFNIYNKQVLKVYHLPVTLTAFQFAIGTLLVAFMWGLNLYKRPKLTSSQLLAIFPLALVHTLGNLFTNMSLGKVAVSFTHTVKSMEPFFSVLLSSTFLGEMPTAWVVASLVPIAGGVALASATEVSFNWVGFLSAMASNLTNQSRNVLSKKLMVNKEESMDNITLFSVITVMSFFLSVPIALFMEGVKFTPAYLQSTGLDVQQVYIRSLLAALCYHAYQQVSYMILERVSPVTHSVANCLKRVIVIVSSVIFFQTPVSPINALGTGIALSGVFLYSRAKRIKPKTD* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3807 383 PANTHER PLASTID PHOSPHATE TRANSLOCATOR 5 379 - -
Mtr4g3807 383 PANTHER SOLUTE CARRIER FAMILY 35 5 379 - -
Mtr4g3807 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 127 218 - -
Mtr4g3807 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 297 377 - -
Mtr4g3807 383 Pfam Triose-phosphate Transporter family 84 373 IPR004853 -
Mtr4g3807 383 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 83 381 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3807 Mtr-Chr4 51827982 51831358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3807 8 381 Antiporters AT5G33320 63.728 8.12e-170 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3807 K15283 - rcu:8288993 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3807 4 51827982 51831358 Mtr3g2453 3 38399162 38404031 ECH
Mtr4g3807 4 51827982 51831358 Mtr4g3807 4 51827982 51831358 ECH
Mtr4g3807 4 51827982 51831358 Mtr3g2453 3 38399162 38404031 PCT