Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3775 ATGGAAAATAAAGATGACACCCCAAAAGAAGCAAAAGATTATTATTCTAGATCAATATGGTGGTCAGAAACAGCACAAGCATTTGAGGATCATAAAACATATGCCACAAATGGAACTTATAGCTTCCAAGAAATACTAACTCCAGAAATTTCTGAAACATTTGGAGATCTCAAAAATTTGAGTAGTAACAAAAACAGAGTTCATGAAATAGTACCGGACACCGGTAGCGAAGAAAACGGTAAATTTGTTCCTTACTCTGTACAATTATTGTCAACAGAAATTGTGGAAATAGTTGAGGATGGAAAGAGCATAACAATCAAGAAAGATAGAAGAGTTGATGACCTTTATGTTGCTGTTGGTGAAGATGATATGGATGTAGTGAAATGGGTTCTTGATCATGCTGTTTCTCCTGGTGCTAGGATTTTTCTTGTCCATGTTTCTCCTCCAATTACATTGATTCCTACGCCAGTTGGGATGCTTGGAAGAAGCCAGCTGACCCCACAACAAGTAAGACGTTACCTGAATGAAGTTAACAATAAGAGGAAAGATCTTTTGCAGAAGTACATCCAGCTGAGCACTGAAGCCAAGGTAACTGCAGAAACGTTGATTCTAGAGAGCAAGGACAAAGGAAAAGCCATTCTGGATCTCATCTCTATTCTTAACATAACCAACCTTGTATTGGGAGTCAAAAAGCTACGGCGCAATGATAAATTAAGGGAAGGAGAGTTTGTGAAGAAAAATGCACCAAAGACATGTGATGTTACATTGATTTACAATGGTGAATTGTTTGTGTATGAGATTGATGCTTTTATGGATGAATGCCAATCACAAAGTAAATATCACTCAAAATGCAACTTCTTTCATCAGTGTATTTGCTTTTCAGGATGTGTGGGAGAAGACATGGATAAATAG 912 0.3728 MENKDDTPKEAKDYYSRSIWWSETAQAFEDHKTYATNGTYSFQEILTPEISETFGDLKNLSSNKNRVHEIVPDTGSEENGKFVPYSVQLLSTEIVEIVEDGKSITIKKDRRVDDLYVAVGEDDMDVVKWVLDHAVSPGARIFLVHVSPPITLIPTPVGMLGRSQLTPQQVRRYLNEVNNKRKDLLQKYIQLSTEAKVTAETLILESKDKGKAILDLISILNITNLVLGVKKLRRNDKLREGEFVKKNAPKTCDVTLIYNGELFVYEIDAFMDECQSQSKYHSKCNFFHQCICFSGCVGEDMDK* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3775 303 Gene3D HUPs 116 249 IPR014729 -
Mtr4g3775 303 Coils Coil 174 194 - -
Mtr4g3775 303 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 121 239 - -
Mtr4g3775 303 Pfam Universal stress protein family 121 242 IPR006016 -
Mtr4g3775 303 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 74 299 - -
Mtr4g3775 303 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 74 299 - -
Mtr4g3775 303 CDD STK_N 116 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3775 Mtr-Chr4 51508722 51510902 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3775 113 263 U-box Gene Family AT3G61390 30.625 4.73e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3775 - - pvu:PHAVU_003G204300g 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3775 4 51508722 51510902 Mtr4g3775 4 51508722 51510902 ECH