Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3773 ATGAATATCCAACTCTTCCACTCCCTCACCATCCTCCTCCACCTCCACATCCACATCCTCATCCTCATCCCCACCACCAACTCCCTCAACTTCCTCTACAACTCCTTCACCACCACCACCAACCTCACTCTCATCCCCGACGCCCACATCCAACCACCTGTCATCCGCATGACCAACGACTCCAACCAATACTCTTACGGCCGTGCCTTCCACCCCACTAAACTCCCCATGCTCAAACCTTCACCTTCCTCAACAAACATCACTTCCTTCTCCACTTCCTTCATCTTCTCCATCTTACCAGACAACCCCACCAGCCCTGGCTTCGGTCTCGCTTTCGTCCTCTGCAACACCACTTCCCCTCCCGGCGCACTCGCTAGTCAATATTTCGGCTTATTCACAAACTCGATTAGCTCTTCTTCAATTTTCCCTCTCATCGCCGTTGAATTTGACACTGGTCAAAACCCTGAGTTTAATGATAAAGACAGCAATCACATCGGAATTGATTTGAATAACATCGAATCCAAAATTCAAACTCCTGCAGGGTATTATAATTCCACCGGAAGCTTCGTTCCGGTTCAGATGAACACTGGGGAGAATATTCGTGCGTGGATTGAATTTGACGGCGAGAGGTTGGAGATAAATGTTACTGTTGCTCCGGTTGGTGTTTCGAAGCCTTTGAAACCGACGCTATCTTATAATGATTCGAGTATAGCTCATTATGTTGCTCCTGAAATGTTCTTTGGTTTTTCAGCTTCGAAAACGAATTGGATTGAAGCGCAGAGAGTTTTAGCATGGAGTTTTAGTGATGATGGGAGTTTGAAAGAGTTGAACACGACAAATTTACCGGTGTTTAAGCGAGGATCATCTTCGTCTTCACTTTCCAGTGGAGCTATTGCTGGGATTGCAGTTGGTTGTTTTGTTTTTGTTGTGTGTTGCACGAGTGTGTTTGTATTATATTTTCGTTGGCGAAAAAGAAGAGAAGATGATGATGATGTTGAAGATTGGGAAATGGAGTATTGGCCTCATAGATTCTCTTATGAGGAACTAAGCAATGCTACAAAGGGTTTTCAGAGAGAGCAGCTTCTAGGTTTTGGAGGGTTTGGAAAAGTTTACAAAGGTACATTAATGAATAAAACATTGGTTGCAGTTAAGTGTGTTAATCATGATTCTAAACAAGGGTTAAGAGAATTTATGGCTGAGATTTCAAGTATGGGGAGGCTTCAACATAAGAATTTAGTACAAATGAGGGGATGGTGTAGAAAGGGCAATGAATTGATGTTGGTTTATGATTATATGCCTAATGGAAGTTTAAACAAGTGGGTTTTTGATAAACCTGAGAAAGTTTTGGGATGGGACCAAAGGCGTAGGATTCTTGTTGATGTGGCAGAAGGGCTTAGCTACCTTCATCATGGTTGGGACCAGGTTGTTATTCATAGGGATATTAAATCTAGTAACATTTTGTTGGATGGTGATATGAGAGGAAGATTGGGAGATTTTGGTTTGGCTAAGCTTTACCAACATGGGCAAGTTCCTAATACCACACGTGTGGTGGGGACTTTAGGGTATTTGGCGCCGGAGATAGCGACGGTTGCAGCGCCTACTTCGGCGAGCGATGTGTATAGTTTTGGGGTGGTGTTGTTGGAGGTGGCTTGTGGAAGGAGGCCGTTGGAGACGGATGTGGTGGAGGAGGAGGTTGTGCTTATTGATTGGGTGAGGGAGTTGTATGCAAAAGAGTGTGTGGTTGAAGCTGCGGATAGTAGGATTAAGGGTGAGTATGATGTGGGTGATATGGAGATGGTGTTGAAGCTTGGGTTGGCTTGTTGTCATCCTGAGCCGAATAGGAGGCCTACTATGAAGGAAGTTGTCGCGCTTCTTCTTGGGGAGGATATTGCGGAGGCGCCGGGGAAAGTGTTGTCTGATTTGGCTCGTGGTGATGACAATGGTGGCGGCGGCGGCAGGGAATCCGATGAGGAGGTGCCTTTGCAATCCACCTAG 1995 0.4556 MNIQLFHSLTILLHLHIHILILIPTTNSLNFLYNSFTTTTNLTLIPDAHIQPPVIRMTNDSNQYSYGRAFHPTKLPMLKPSPSSTNITSFSTSFIFSILPDNPTSPGFGLAFVLCNTTSPPGALASQYFGLFTNSISSSSIFPLIAVEFDTGQNPEFNDKDSNHIGIDLNNIESKIQTPAGYYNSTGSFVPVQMNTGENIRAWIEFDGERLEINVTVAPVGVSKPLKPTLSYNDSSIAHYVAPEMFFGFSASKTNWIEAQRVLAWSFSDDGSLKELNTTNLPVFKRGSSSSSLSSGAIAGIAVGCFVFVVCCTSVFVLYFRWRKRREDDDDVEDWEMEYWPHRFSYEELSNATKGFQREQLLGFGGFGKVYKGTLMNKTLVAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNKWVFDKPEKVLGWDQRRRILVDVAEGLSYLHHGWDQVVIHRDIKSSNILLDGDMRGRLGDFGLAKLYQHGQVPNTTRVVGTLGYLAPEIATVAAPTSASDVYSFGVVLLEVACGRRPLETDVVEEEVVLIDWVRELYAKECVVEAADSRIKGEYDVGDMEMVLKLGLACCHPEPNRRPTMKEVVALLLGEDIAEAPGKVLSDLARGDDNGGGGGRESDEEVPLQST* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3773 664 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Mtr4g3773 664 MobiDBLite consensus disorder prediction 637 664 - -
Mtr4g3773 664 PANTHER - 13 659 - -
Mtr4g3773 664 CDD STKc_IRAK 362 625 - -
Mtr4g3773 664 CDD lectin_legume_LecRK_Arcelin_ConA 29 271 IPR001220 GO:0030246
Mtr4g3773 664 Gene3D - 26 286 - -
Mtr4g3773 664 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 13 659 - -
Mtr4g3773 664 SUPERFAMILY Protein kinase-like (PK-like) 332 625 IPR011009 -
Mtr4g3773 664 SMART serkin_6 356 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3773 664 Pfam Protein kinase domain 356 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3773 664 Gene3D Transferase(Phosphotransferase) domain 1 432 633 - -
Mtr4g3773 664 ProSitePatterns Legume lectins beta-chain signature. 145 151 IPR019825 -
Mtr4g3773 664 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 284 IPR013320 -
Mtr4g3773 664 Pfam Legume lectin domain 28 281 IPR001220 GO:0030246
Mtr4g3773 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Mtr4g3773 664 ProSiteProfiles Protein kinase domain profile. 356 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3773 664 Gene3D Phosphorylase Kinase; domain 1 341 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3773 Mtr-Chr4 51498773 51501365 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3773 25 627 Receptor kinase-like Gene Family AT1G15530 63.993 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr4g3773 Pkinase 5.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3773 - - gmx:100780660 959.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3773 4 51498773 51501365 Mtr4g3773 4 51498773 51501365 ECH