Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3771 ATGGAATCATACCCCAAAAATACAATCAAGTTCCTCTTTAGCTACGGCGGAAAAATCCTCCCCCGCCTCACCGACGGCAAGCTCCGCTACACCGGTGGCCACACCCGAGTCCTCGCTCTCCCTCCACCCATTTCTTTCTCAGAGTTGATGGTGAAGCTAGTTGAATTATGTGGTTCATCAGTCACACTGAAATGTCCATTACCAAACGGAGATTTAGAGACATTGATTTCAATCACCAGCGATGAAGATCTGAAAAATATAATTGAAGAATACGATCGAGCTTCTTCATCATTAATTCATCCATTGAAGATCAGAGCCATTCTTTCACCGCCCAAATCATTCAAGAAATTATCTCCTCCTCCGTCTTCTTCGTCCAGCTCAACTCACTCTCTGCCTGGTTCGCCTCATGCCTTCGTGGAATCACCGTCGTATGTGGCTGTGAATCGGCTTAACCGTCTGAAAGGTAGCTGTTACACAAGGCAATTAGATGGAAGCCCTAGATTCCTTTACCGGTTCGCAAATAATTATTGTCATTGA 537 0.4525 MESYPKNTIKFLFSYGGKILPRLTDGKLRYTGGHTRVLALPPPISFSELMVKLVELCGSSVTLKCPLPNGDLETLISITSDEDLKNIIEEYDRASSSLIHPLKIRAILSPPKSFKKLSPPPSSSSSSTHSLPGSPHAFVESPSYVAVNRLNRLKGSCYTRQLDGSPRFLYRFANNYCH* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3771 178 MobiDBLite consensus disorder prediction 115 134 - -
Mtr4g3771 178 SUPERFAMILY CAD & PB1 domains 25 118 - -
Mtr4g3771 178 SMART PB1_new 23 111 IPR000270 GO:0005515
Mtr4g3771 178 MobiDBLite consensus disorder prediction 118 134 - -
Mtr4g3771 178 PANTHER OS05G0427100 PROTEIN-RELATED 1 178 - -
Mtr4g3771 178 Pfam PB1 domain 25 96 IPR000270 GO:0005515
Mtr4g3771 178 PANTHER PB1 DOMAIN PROTEIN 1 178 - -
Mtr4g3771 178 CDD PB1_UP2 14 108 - -
Mtr4g3771 178 Gene3D - 27 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3771 Mtr-Chr4 51483018 51484529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3771 7 90 MAP Kinase Kinase Kinase AT2G35050 51.190 4.35e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3771 - - mtr:MTR_4g105020 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3771 4 51483018 51484529 Mtr4g3771 4 51483018 51484529 ECH
Mtr4g3771 4 51483018 51484529 Mtr3g2426 3 38078627 38080352 PCT