Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3751 ATGGAGATGGAACGCGTCTTCGAATTTCCTCACACTCACATGGATCGTCGACCAAGGAAGAGAGCAAGGTTGGGTTGGGATGTTCCTGAAACCCCAAAGGCTCAGGTAGAATTGTTTTTTGGACAAGAGCTTGGGAATATTTCAAGCTATGCTCCTTCAGGGGTTCCCTCGGAACACACCACTAGTTCCCTATCTGTTAAGGGTGTTGCTCGAAATGGTTCTCCCCCTTGGCGAGATGATGACAAAGATGGCCATTACACTTTTGCTGTTGGAGAAAATTTAACTTCCCGCTATAAGATCCACAGCAAAATGGGAGAAGGAACTTTTGGGCAGGTATTGGAATGCTGGGACAGAGAAAGGAAGGAAATGGTTGCCATTAAAATTGTCCGTGGAATAAAAAAATATCGTGAAGCAGCCATGATAGAAATTGAGATGTTGCAACAGCTTGGTAAACATGATATAGGTGGCAATCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTAATCATATATGTATTGTCTTTGAGAAACTTGGACCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTCCGTGAGATTGGCAGACAACTATTGGAATGTATAGCATTTATGCATGATTTGCGCATGATCCATACTGACCTAAAGCCTGAAAACATACTCCTTGTTTCACCAGACTATGTCAAAGTTCCTGACTACAAGATTTCATCTAGGTCACCAAACTCATATTTCAAGAAAGTGCCCAAGTCTAGTGCTATCAAGGTTATTGATTTTGGAAGCACCACATATGAGCGAGTAGATCAGAGCTACATTGTCTCAACTCGTCATTATAGAGCACCTGAAGTTATCCTTGGTCTTGGCTGGAGTCATTCATGCGATATATGGAGTGTGGGTTGTATATTGGTCGAGTTATGCACGGGCGAAGCTTTGTTTCAGACTCATGAAAATTTAGAGCACCTTGCCATGATGGAGAGGGTACTTGGTCCACTACCAATGCATATGTTGAAGAGAGTCGACCGACATGCTGAGAAGTATGTCAGAAGAGGTAAATTGGACTGGCCGGTGGGTGCAACCTCGAGGGAGAGTATTAAAGCTGTAATGAAGCTCCCTAGACTACAGAATCTAATAATGCAGCATGTTGATCATTCAGCTGGTGATCTCATACATCTGTTGCAAGGGTTACTTAGATATGACCCCTCTGAAAGAATCACTGCCAAGGAAGCCCTCAGACATTCCTTTTTTATGAGGAGATCACATTAG 1287 0.4274 MEMERVFEFPHTHMDRRPRKRARLGWDVPETPKAQVELFFGQELGNISSYAPSGVPSEHTTSSLSVKGVARNGSPPWRDDDKDGHYTFAVGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEMLQQLGKHDIGGNRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECIAFMHDLRMIHTDLKPENILLVSPDYVKVPDYKISSRSPNSYFKKVPKSSAIKVIDFGSTTYERVDQSYIVSTRHYRAPEVILGLGWSHSCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPMHMLKRVDRHAEKYVRRGKLDWPVGATSRESIKAVMKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPSERITAKEALRHSFFMRRSH* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3751 428 Pfam Protein kinase domain 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3751 428 SUPERFAMILY Protein kinase-like (PK-like) 85 424 IPR011009 -
Mtr4g3751 428 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 426 - -
Mtr4g3751 428 MobiDBLite consensus disorder prediction 52 69 - -
Mtr4g3751 428 Gene3D Phosphorylase Kinase; domain 1 85 178 - -
Mtr4g3751 428 ProSiteProfiles Protein kinase domain profile. 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3751 428 CDD PKc_CLK 85 423 - -
Mtr4g3751 428 SMART serkin_6 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3751 428 MobiDBLite consensus disorder prediction 52 77 - -
Mtr4g3751 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Mtr4g3751 428 PANTHER KINASE AFC1 1 426 - -
Mtr4g3751 428 Gene3D Transferase(Phosphotransferase) domain 1 152 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3751 Mtr-Chr4 51289139 51293165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3751 103 423 Core Cell Cycle Gene Families AT1G76540 26.205 5.83e-26 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Mtr4g3751 Pkinase 6.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3751 K08287 - gmx:100804452 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3751 4 51289139 51293165 Mtr4g3751 4 51289139 51293165 ECH