Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3747 ATGCTACTCATAATCTCTTCCATCTTTGCCATCCTCTTTTTGCTAATAAAATGGTATTCTAATTCTACAGAAACCAAAAACTCACCTCCAAAATTACCTATAATAGGAAATCTCCATCAACTTGGCCAATTCCCTCACCGCTCATTTCAATCTCTAGCTAAAAAATACGGCCCTTTCATGCGACTTAATTTTGGTCGTGTACCAGTTCTCGTGATCTCTTCGGCTGATGCAGCACATGAGATAATGAAAACACATGATCATGTCTTTGCAAATAGACCCCCCAAAATAAATTACGACATACTTTTATACAATTTTAGGGATGTTTCATCAGCTCCATATGGAGAGTATTGGAGGCAGTTAAGGAGCATATGTGTGTTACATCTTCTTAGTGCTAAAAGCGTTCGTTCTTTTCGCGCTGTAAGAGAGGAAGAAACGGGTTTAATGATGGAGAAAATAAAGCACTGTTCTTCTTCCACTTCATTACCAGCGAATTTAAGTGAATTAATGGCAACAACTACGAATGATATAGTTTGTAGGGTTGTTTTGGGAAGAAAGTATAGTGGTGAAAATGGGAAGGGATTTTCAAAGTTATTGATGGATTTTACTGAGTTACTTGGTGCTTTTGTTGTTGGGGACTATGTTCCTTGGCTTGATTGGTTCAGCCATCTTTCAGGATATTATGCAAGAGCAAAAAAGGTGGCTAAACAATTTGATGATCTTTTGGAGGGTGTTGTTGAAGATCATATGAATAATCCGAAAGGAGATAGTGACGAGCATGATGACTTTGTTGAAGTTTTGCTTTGGATCCAAAGAACAGAATCACTTGGCTTTCCTATTGACAAAACGGTCATAAAGGCTCTACTACTGGACATGTTTATTGCAGGTACAGACACCATATCCACTTTGCTAGAGTGGTCAATGACAGAACTCTTACGGCATCCAAATATCATGAAAAAATTGCAAGAAGAAGTAAAGAGAGTGGCTAATGGTAGAACACACATAACTGAAGAAGATTTAAGTCACATGAAATACTTAAATGCAGTAGTTAAAGAAACCCTACGTTTACATCCCTCAATTCCATTACTAGTACCAAGAGAAAGCAGACAAGATATCAAACTAAATGGACACCACATCAAAGCTGGCACACGAGTTTTTATCAATGCTTGGGCCATTGCAAGAGATCCTACACATTGGGATCAACCTGAAGAGTTCAAGCCAGAGAGATTCTTGAATTGTTCAATAGATGTTAAAGGAAAAGATTTCCAGGTGATTCCATTTGGAGCTGGCAGAAGGGGTTGTCCTGGGGCAGTTTATGCTACGGCTGTCAATGATCTTGTGTTGGCAAACCTTGTACATCAATTTAACTGGGAATTACCTGGTGCTGCTGAAGGATTGGACATGTCTGAATCGTTTGGCTTCACAGTGCATAGAAAGATTCCTCTTATGGCAATTGCAACCCCTTATAAGAACTAA 1473 0.3883 MLLIISSIFAILFLLIKWYSNSTETKNSPPKLPIIGNLHQLGQFPHRSFQSLAKKYGPFMRLNFGRVPVLVISSADAAHEIMKTHDHVFANRPPKINYDILLYNFRDVSSAPYGEYWRQLRSICVLHLLSAKSVRSFRAVREEETGLMMEKIKHCSSSTSLPANLSELMATTTNDIVCRVVLGRKYSGENGKGFSKLLMDFTELLGAFVVGDYVPWLDWFSHLSGYYARAKKVAKQFDDLLEGVVEDHMNNPKGDSDEHDDFVEVLLWIQRTESLGFPIDKTVIKALLLDMFIAGTDTISTLLEWSMTELLRHPNIMKKLQEEVKRVANGRTHITEEDLSHMKYLNAVVKETLRLHPSIPLLVPRESRQDIKLNGHHIKAGTRVFINAWAIARDPTHWDQPEEFKPERFLNCSIDVKGKDFQVIPFGAGRRGCPGAVYATAVNDLVLANLVHQFNWELPGAAEGLDMSESFGFTVHRKIPLMAIATPYKN* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3747 490 Pfam Cytochrome P450 29 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3747 490 PANTHER CYTOCHROME P450 71B11-RELATED 5 489 - -
Mtr4g3747 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Mtr4g3747 490 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 489 - -
Mtr4g3747 490 PRINTS E-class P450 group I signature 53 72 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3747 490 PRINTS E-class P450 group I signature 77 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3747 490 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3747 490 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3747 490 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3747 490 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3747 490 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3747 490 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3747 490 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3747 490 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3747 490 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3747 490 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3747 490 SUPERFAMILY Cytochrome P450 29 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3747 490 Gene3D Cytochrome P450 19 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3747 Mtr-Chr4 51236259 51238479 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3747 1 488 Cytochrome P450 AT3G48280 52.439 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3747 - - mtr:MTR_4g104540 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3747 4 51236259 51238479 Mtr4g3747 4 51236259 51238479 ECH