Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3746 ATGAATAATGATTATGCAAATTTTATTGACCATATATTTGTTTCTATTCAGGACATGTTTATTGCAGGTACAGACACCATATCCACTTTGCTAGAGTGGTCAATGACAGAACTCTTACGGCATCCAAATATCATGAAAAAATTGCAAGAAGAAGTAAAGAGAGTGGCTAATGGTAGAACACACATAACTGAAGAAGATTTAAGTCACATGAAATACTTAAATGCAGTAGTTAAAGAAACCCTACGTTTACATCCCTCAATTCCATTACTAGTACCAAGAGAAAGCAGACAAGATATCAAACTAAATGGACACCACATCAAAGCTGGCACACGAGTTTTTATCAATGCTTGGGCCATTGCAAGAGATCCTACACATTGGGATCAACCTGAAGAGTTCAAGCCAGAGAGATTCTTGAATTGTTCAATAGATGTTAAAGGAAAAGATTTCCAGGTGATTCCATTTGGAGCTGGCAGAAGGGGTTGTCCTGGGGCAGTTTATGCTACGGCTGTCAATGATCTTGTGTTGGCAAACCTTGTACATCAATTTAACTGGGAATTACCTGGTGCTGCTGAAGGATTGGACATGTCTGAATCGTTTGGCTTCACAGTGCATAGAAAGATTCCTCTTATGGCAATTGCAACCCCTAACAAGAACTAA 657 0.3881 MNNDYANFIDHIFVSIQDMFIAGTDTISTLLEWSMTELLRHPNIMKKLQEEVKRVANGRTHITEEDLSHMKYLNAVVKETLRLHPSIPLLVPRESRQDIKLNGHHIKAGTRVFINAWAIARDPTHWDQPEEFKPERFLNCSIDVKGKDFQVIPFGAGRRGCPGAVYATAVNDLVLANLVHQFNWELPGAAEGLDMSESFGFTVHRKIPLMAIATPNKN* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3746 218 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 217 - -
Mtr4g3746 218 SUPERFAMILY Cytochrome P450 10 215 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3746 218 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 154 163 IPR017972 GO:0005506|GO:0016705
Mtr4g3746 218 Pfam Cytochrome P450 10 205 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3746 218 PANTHER CYTOCHROME P450 71B11-RELATED 5 217 - -
Mtr4g3746 218 Gene3D Cytochrome P450 6 212 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3746 218 PRINTS E-class P450 group I signature 11 28 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3746 218 PRINTS E-class P450 group I signature 31 57 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3746 218 PRINTS E-class P450 group I signature 74 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3746 218 PRINTS E-class P450 group I signature 115 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3746 218 PRINTS E-class P450 group I signature 151 161 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3746 218 PRINTS E-class P450 group I signature 161 184 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3746 218 PRINTS P450 superfamily signature 22 39 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3746 218 PRINTS P450 superfamily signature 75 86 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g3746 218 PRINTS P450 superfamily signature 152 161 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3746 Mtr-Chr4 51236105 51256988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3746 18 215 Cytochrome P450 AT3G48280 52.736 3.42e-77 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3746 - - mtr:MTR_4g104540 411.764