Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3729 ATGAAGAAGGTGACAGTAATTGTGTCCATTCTTCTCTTCTCAATACTTCGTTTTCAACCATTCGTGTCTTCGTCGCCTCTCTTATACGGAAACCAGGTTTATGAGGAATCTTCTGGTGAAAGGAATCTTAATCAGGAGCACGAGCATGCTCCTGAAGTGCATTGCTCCAGAGAGAGAAGTAGGGTTGCTTCGAAAGTGATAGAGGAGTATTTGACACCATTCGTGGAAAAAGAAAACTATCAGCTTTCAAGAAAGTGCAGACTTCACCCTGAGAATGATATGTTTAGGGATCAAGAAGAGCATAGAATATACCTTGACAGAAATGAATGGCGATGTGGATATTGCAAGAAAAGCTTCCGTGAAGAAAAATTTCTTGATCAGCATTTGGATAACAGGCACTGCAATCTTCTGAATCTAAGTCATGGCAAATGCTTGGCTGATTTATGTGGGGCATTGCATTGTGATGCTGTGACGAATTCCAAATCCTCTAGAAGCAAGTGTAATCCAGCAGCTGCTGCAAGAAATCGTCACCTATGTGAGAGTCTTGCTGACAGTTGTTTTCCCATAAGCGGGGGTCTATCAGCAAGCCGTCTTCATGAATTGTTTCTGCACCAATTTTGTGATGCTCACTCCTGCTCAGGGAAACACAAACCCTTCTCTAGAGGAGGCAAGGGCCAAGGAAGTTTCTTTCGCCTGGCTGCCGGAGCATTGATCTTAGTGCTACTTCCTGTGTTCTATCTCTTTATTTATTTGATACAATGTGATATGAATGGTCGAACTCAAGATCTTCGTCGCATCTCCAAATCTGGATGGAAAGCAAAGCCATCATGA 831 0.4284 MKKVTVIVSILLFSILRFQPFVSSSPLLYGNQVYEESSGERNLNQEHEHAPEVHCSRERSRVASKVIEEYLTPFVEKENYQLSRKCRLHPENDMFRDQEEHRIYLDRNEWRCGYCKKSFREEKFLDQHLDNRHCNLLNLSHGKCLADLCGALHCDAVTNSKSSRSKCNPAAAARNRHLCESLADSCFPISGGLSASRLHELFLHQFCDAHSCSGKHKPFSRGGKGQGSFFRLAAGALILVLLPVFYLFIYLIQCDMNGRTQDLRRISKSGWKAKPS* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3729 276 ProSiteProfiles Zinc finger C2H2 type domain profile. 110 133 IPR013087 -
Mtr4g3729 276 ProSitePatterns Zinc finger C2H2 type domain signature. 112 133 IPR013087 -
Mtr4g3729 276 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 19 276 - -
Mtr4g3729 276 PANTHER ZINC FINGER PROTEIN-RELATED 19 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3729 Mtr-Chr4 51025638 51031011 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3729 31 276 C2H2 Transcription Factor Family AT5G63280 61.694 2.82e-105 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr4g3729 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3729 4 51025638 51031011 Mtr4g3729 4 51025638 51031011 ECH