Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3722 ATGGGTTCTTACTATGCTTCTTTATATCCAAATTTGCCTATTTTAGAAAACAGTGCTACTTCAACATGGATCCTTAATCCATTTTCTGATCATGAAACTGAAACCATTAGGGATCACAAGAAATTGAAAAGATCAACCGTAACTATCCCTATTTGGTTTGCTAATTTCAGCAGCCATAGTAATAGTTTCTTCAATAACATCAACAGCAATAACAACAGTGTGAATAGCATTCCAAGGCTTCATTTCAGAGATCACATAAGAACTTATAAACAAAGATATTTTGCTTCTGAAGCTGTTGAAGAAGCAGCAGAAGATAACTTCAACTACAATAATTGCGAAGCTGAAGAAGATGGTTCATGTGCTGATGGAATGAGACTAGTTCAACTTCTAATTGCATGTGCTGAAGCTGTCGCGTGTCGCGATAAATCACACGCTTCGGTTTTACTATCTGAGCTTAAATCAAATGCTTTGGTGTTTGGTTCTTCGTTTCAAAGAGTTGCTTCTTGTTTTGTTCAAGGACTCACAGAGAGACTAACTCTGATTCAACCAATTGGTAATAACTCTGCTGGATCAGATACAAAATCAATGATGAACATAATGGATGCTGCATCAGAAGAAATGGAAGAAGCATTCAAGTTGGTTTATGAAAATTGTCCACATATTCAATTTGGACATTTTGTGGCTAATTCCATAATATTGGAAGCCTTTGAGGGTGAGAGTTTTCTTCATGTGGTTGATCTTGGCATGAGCCTTGGTCTTCCACATGGACACCAATGGCGAGGACTAATTCAAAGTCTCGCGGATCGATCCAGCCACCGTGTTCGGAGGCTTAGGATCACAGCGATTGGTCTATGCATTGCTAGAATCCAAGTCATTGGTGAAGAACTCTCAATTTACGCGAAAAACTTGGGGATTCATTTGGAATTCTCAATTGTTGAGAAGAATTTGGAGAATTTGAAACCTAAGGACATAAAAGTGAATGAAAAAGAGGTCCTTGTGGTTAACAGCATTCTTCAATTGCATTGTGTTGTTAAAGAGAGTCGTGGCGCTTTGAATGCGGTTTTACAAATGATACACGGTCTTTCACCGAAAGTGTTGGTTATGGCTGAGCAAGATTCTGGTCATAATGGACCTTTTTTCCTTGGAAGGTTTATGGAATCATTGCATTATTATTCTGCTATTTTTGACTCATTGGATGCTATGCTGCCAAAGTATGACACTAAGAGGGCAAAAATGGAACAGTTTTATTTTGCTGAGGAGATAAAGAACATTGTGAGCTGTGAAGGACCATTGAGGATGGAGAGGCATGAGAAAGTTGATCAGTGGAGGAGGAGAATGAGTAGGGCTGGATTTCAAGGTTCACCTATTAAGATGGTGGTTCAAGCTAAGCAGTGGCTTGTGAAGAATAATGTTTGTGATGGATATACTGTTGTGGAAGAGAAAGGGTGTTTGGTTCTTGGATGGAAATCAAAGCCTATTGTTGCAGTTTCTTGCTGGAAATGCTGA 1506 0.3891 MGSYYASLYPNLPILENSATSTWILNPFSDHETETIRDHKKLKRSTVTIPIWFANFSSHSNSFFNNINSNNNSVNSIPRLHFRDHIRTYKQRYFASEAVEEAAEDNFNYNNCEAEEDGSCADGMRLVQLLIACAEAVACRDKSHASVLLSELKSNALVFGSSFQRVASCFVQGLTERLTLIQPIGNNSAGSDTKSMMNIMDAASEEMEEAFKLVYENCPHIQFGHFVANSIILEAFEGESFLHVVDLGMSLGLPHGHQWRGLIQSLADRSSHRVRRLRITAIGLCIARIQVIGEELSIYAKNLGIHLEFSIVEKNLENLKPKDIKVNEKEVLVVNSILQLHCVVKESRGALNAVLQMIHGLSPKVLVMAEQDSGHNGPFFLGRFMESLHYYSAIFDSLDAMLPKYDTKRAKMEQFYFAEEIKNIVSCEGPLRMERHEKVDQWRRRMSRAGFQGSPIKMVVQAKQWLVKNNVCDGYTVVEEKGCLVLGWKSKPIVAVSCWKC* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3722 501 Pfam GRAS domain family 126 500 IPR005202 -
Mtr4g3722 501 ProSiteProfiles GRAS family profile. 117 500 IPR005202 -
Mtr4g3722 501 PANTHER DELLA PROTEIN RGL1-LIKE 29 500 - -
Mtr4g3722 501 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 29 500 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3722 Mtr-Chr4 50983600 50985324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3722 123 500 GRAS Transcription Factor Family AT1G66350 36.649 1.85e-74 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr4g3722 GRAS 5.9e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3722 - - gmx:100813548 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3722 4 50983600 50985324 Mtr4g3722 4 50983600 50985324 ECH