Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3715 ATGGCGGCAGGGAGACAAAGTGTTTTAGGGAAGAGAGATTCTTACAATTACAAACATGGTTCCGTTAAGGAATTTGATTACTATAAGAATGATTCTGGAAAAGAGGATAGAGAAGAAGGTGAGATCCTTGTTGATGGTGATGAAATTTTGCTACCTTTGGAGAAGAGAAGAAAATTCTCTCCTGTTGTATGGGATCTGGCTGAGAAGAAGGGGAAGAACTCTTCCAAAGATGGTGTCACAAAGTTATACGTGGAAGAACAAAGTTCTGAAGGTGATGATGTTTTAAGTGGATCTTCGAAGAATTCGTCTTGTGTGGATGAAGAAAGTGATATGCAGGGGTGGAACATCACAAAGTCGAAGTGGGCTTGTGATGATGATCTTTCACCGATGGCAGATGATGGTAAATACAAGCTCACAAAGTCAAAGTGGGCTTCTGATGAATTTTCGCCTATCGGTGATGATGATAAATACAAGCAACGCAGAAGAAGCTCAAGTTCAGAAGTTGGTGGTAGTTCTGATAGCACAATTACTAGATCCGATGTTGATGAAGATGTTAGTGATGATTCACCATCCGATGCTTATGAAAATAGTGGTATGATGCATGTGGAGAGAAGTTTTAACATGTGTCAGAGTTGCAGATCTGTGTCTGAGTTTGAAATGATTAAGAAGATAAATGAAGGAACTTACGGTGTTGTCTATAAAGCTAAGGATAAGAAGACTGGAGAAATTGTAGCATTGAAGAAGGTGAAGATGGACATGGAGAGGGAAGGCTTTCCAATTTCAGCTTTGAGAGAAATGAATATTCTCTTGTCCTTAGACCATCCCTCTATTGTTGATGTTAAAGAAGTAGTCGTGGATGATAATGACAACAATGACGGTACTTATATGGTAATGGAGCATATGCAGTATGACCTTAAGCAGTTATTGGAGTCTAAGTCGCAGCCTTTCAGTATGGGTGAGATAAAATCCTTCATGAAGCAACTTCTTGAAGGTGTCAAATATCTCCATGATAACTGGATTCTCCACCGGGATTTGAAGACATCTAACATTCTGTTGAATAAAGATGGGAAGTTGAAAATATGTGACTTTGGAATGTCAAGGCAGTATGGAAGCCCTCTGAAGCAATATACTTCTCTTGTAGTTACACTATGGTACAGAGCACCTGAACTTTTGTTGGGCGCTAAGAAATACTCCAAGGCAATTGATATGTGGTCTCTAGGCTGTATAATGGCTGAATTAATTTCCAAGGAGCCACTTTTCAAGGGCAAAACTGAAGTTGAACAACTTGACAAGATTTTTCGAACTCTTGGTACACCAGATGAGAAAACATGGCCAGGATTATCCAAATTGCCTGGCTCTAAAGCAAATTTTGTTAAGCAACGGTGTAGTATGCTAAGGATGAAGTTTCCAGCCGCATCTTTCACTGGTTTGCCAGTTTTATCTGAGTCGGGATTTGACTTGTTGAATAAACTTCTAGCTTATGATCCTGATAAGAGGATATCTGCAGAAGCTGCTTTGCGACATGATTGGTTTCGTGAAGGTCCACTTCCGAGATCTGATTGCAATCCAGTTTTTTCTTCATGGTAG 1587 0.3982 MAAGRQSVLGKRDSYNYKHGSVKEFDYYKNDSGKEDREEGEILVDGDEILLPLEKRRKFSPVVWDLAEKKGKNSSKDGVTKLYVEEQSSEGDDVLSGSSKNSSCVDEESDMQGWNITKSKWACDDDLSPMADDGKYKLTKSKWASDEFSPIGDDDKYKQRRRSSSSEVGGSSDSTITRSDVDEDVSDDSPSDAYENSGMMHVERSFNMCQSCRSVSEFEMIKKINEGTYGVVYKAKDKKTGEIVALKKVKMDMEREGFPISALREMNILLSLDHPSIVDVKEVVVDDNDNNDGTYMVMEHMQYDLKQLLESKSQPFSMGEIKSFMKQLLEGVKYLHDNWILHRDLKTSNILLNKDGKLKICDFGMSRQYGSPLKQYTSLVVTLWYRAPELLLGAKKYSKAIDMWSLGCIMAELISKEPLFKGKTEVEQLDKIFRTLGTPDEKTWPGLSKLPGSKANFVKQRCSMLRMKFPAASFTGLPVLSESGFDLLNKLLAYDPDKRISAEAALRHDWFREGPLPRSDCNPVFSSW* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3715 528 Pfam Protein kinase domain 218 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3715 528 Gene3D Transferase(Phosphotransferase) domain 1 303 518 - -
Mtr4g3715 528 ProSiteProfiles Protein kinase domain profile. 218 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3715 528 PANTHER CELL DIVISION PROTEIN KINASE 173 528 - -
Mtr4g3715 528 CDD STKc_CDC2L1 212 511 IPR045267 GO:0004674|GO:0005524|GO:0006468
Mtr4g3715 528 MobiDBLite consensus disorder prediction 149 163 - -
Mtr4g3715 528 SMART serkin_6 218 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3715 528 ProSitePatterns Serine/Threonine protein kinases active-site signature. 340 352 IPR008271 GO:0004672|GO:0006468
Mtr4g3715 528 PANTHER CYCLIN-DEPENDENT KINASE 173 528 - -
Mtr4g3715 528 MobiDBLite consensus disorder prediction 70 111 - -
Mtr4g3715 528 MobiDBLite consensus disorder prediction 91 111 - -
Mtr4g3715 528 Gene3D Phosphorylase Kinase; domain 1 206 302 - -
Mtr4g3715 528 SUPERFAMILY Protein kinase-like (PK-like) 210 516 IPR011009 -
Mtr4g3715 528 MobiDBLite consensus disorder prediction 149 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3715 Mtr-Chr4 50902656 50906066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3715 213 523 Core Cell Cycle Gene Families AT5G10270 47.840 2.25e-93 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Mtr4g3715 Pkinase 2.8e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3715 K08818 - gmx:100788840 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3715 4 50902656 50906066 Mtr4g3715 4 50902656 50906066 ECH