Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3712 ATGGTTACTTGCAATTCCATTTCCCTTTCTCACAATCTCCATTTCTATACCAGATTTCATCGCCTTCACCCGACGCGGCGTTCTCATTATTGCCGTTTTCGTTCCAATGCTCTCCCAAGAGATACTGATGGAGCCAAAGTAGTGCACAAAAGACCAAGAAGAATTGAAGGTCCTAGAAAAAGCATGGAAGATTCCGTTCAACGAAAGATGGAGCAATTTTACGAAGGGTCAGATGGGCCGCCCCTTCGAGTTCTTCCTATTGGTGGGTTGGGTGAAATTGGGATGAATTGTATGCTTGTTGGGAATCATGATCGATATATCCTCGTTGATGCCGGTGTCATGTTTCCAGGCGATGATGAGCTTGGGGTCCAGAAGATAATACCTGATACAACATTTATTAAAAAATGGAGCCACAAAATTGAAGCAGTAGTTATAACACACGGTCATGAAGATCATATCGGTGCATTGCCTTGGGTCATCCCAATGTTGGATTCTCAAACACCAGTTTTTGCGTCATCGTTTACAATGGAGCTTATAAGAAAACGTTTGAAGGATCATGGTATTTTTGTTCCATCCCGATTAAAAGTATTTAGAACAAGGAAGAAGTTTGTAGCTGGGCCATTTGAGATAGAGCCTATTACAGTGAGCCATTCTATTCCGGATTGCTGTGGATTAGTTCTTCGCTGTTCTGATGGTACTATTCTTCACACTGGGGATTGGAAGATTGATGAAACGCCATTAGATGGTAAAGTTTTTGATCGGGAAGCTCTAGAGGAACTGTCCAAAGAAGGAGTCACATTGATGATGAGTGATTCAACAAATGTACTCTCACCTGGAAGGACAATGAGCGAGTCTGTTGTAGCTGATGCATTATTGAGGCATATTTCAGCTGCTAAAGGAAGGGTTATAACAACCCAGTTTTCATCTAACATTCATCGTCTTGGAAGTCTGAAAGCTGCTGCTGATTTGACCGGCCGAAAGTTGGTATTTGCTGGCATGTCTTTAAGGACATATTTGGATGCAGCTTGGAAAGATGGAAAGGTTCCAATTGATTCATCCACTCTGGTGAAAGTAGAGGATATGCATGCTTATGCACCTAAGGATTTGCTGATTGTGACAACAGGTTCACAAGCAGAACCACGTGCTGCCTTGAACCTTGCATCTTACGGAAGTAGTCATGCTTTCGAACTGACAAAGGAAGACACTGTGTTGTATTCAGCTAAGGTTATCCCTGGTAATGAGTCTCGTGTTATGGAAATGCTAAACCGCATATCAGAGATTGGACCAACAATAGTCATGGGGAAGAATGAATGCCTACACACATCTGGTCATGCGTATCGTGGTGAATTGGAGGAAGTACTTAGAATTGTGAAGCCACAGCATTTTCTTCCCATACATGGCGAACTCTTGTTCTTGAAGGAGCATGAATTACTTGGAAAATCAACTGGCATTCGACACACTGCTGTTATTAAGAATGGAGAGATGCTCGGCGTTTCACATTTGAGAAATAGAAAAGTCCTTTCTAATGGTTTTATTTCCCTTGGAAAAGAGAATTTGGAGTTGAAGTATAGTGACGGTGACAAAGCATTTGGCACATCAAGTGAACTCTTCATTGATGAAAGACTAAGAATTGCATTAGACGGCATCATTGTAGTTAGCATGGAAGTATGTCGCGCTCAAAGTTTAGACAGTTCGGTTGAAAACACCTTAAAAGGAAAGATAAGAATTACCACAAGATGCCTATGGCTTGACAAAGGGAAGCTGTTGGACGCACTCCATAAAGCTGCTCATGCTTCTCTTTCAAGCTGCCCTGTAAACTGCCCACTGGCTCACATGGAAAAGACTGTGTCTGAGATGTTGAGGAAAATGGTGAGGAAGTATAGTGGCAAACGACCTGAAGTTATTGCCGTCGCTATAGAAAATCCTGGAGCTGTTCTTGCTACTGAGATAAACACGAAGTTATCTGGAAAATCCTATGTAGGTGGGATATCAACATTTAGAAATGTGGTGCATAAAGAAAATCAATCCACCAAAATGCAAATGAGAGGAGATCAAGAATGA 2061 0.4187 MVTCNSISLSHNLHFYTRFHRLHPTRRSHYCRFRSNALPRDTDGAKVVHKRPRRIEGPRKSMEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILVDAGVMFPGDDELGVQKIIPDTTFIKKWSHKIEAVVITHGHEDHIGALPWVIPMLDSQTPVFASSFTMELIRKRLKDHGIFVPSRLKVFRTRKKFVAGPFEIEPITVSHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGKVFDREALEELSKEGVTLMMSDSTNVLSPGRTMSESVVADALLRHISAAKGRVITTQFSSNIHRLGSLKAAADLTGRKLVFAGMSLRTYLDAAWKDGKVPIDSSTLVKVEDMHAYAPKDLLIVTTGSQAEPRAALNLASYGSSHAFELTKEDTVLYSAKVIPGNESRVMEMLNRISEIGPTIVMGKNECLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTAVIKNGEMLGVSHLRNRKVLSNGFISLGKENLELKYSDGDKAFGTSSELFIDERLRIALDGIIVVSMEVCRAQSLDSSVENTLKGKIRITTRCLWLDKGKLLDALHKAAHASLSSCPVNCPLAHMEKTVSEMLRKMVRKYSGKRPEVIAVAIENPGAVLATEINTKLSGKSYVGGISTFRNVVHKENQSTKMQMRGDQE* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3712 686 Gene3D - 283 433 IPR042173 -
Mtr4g3712 686 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 437 476 IPR011108 -
Mtr4g3712 686 SUPERFAMILY Metallo-hydrolase/oxidoreductase 82 496 IPR036866 -
Mtr4g3712 686 CDD RNaseJ_MBL-fold 85 496 - -
Mtr4g3712 686 PANTHER RIBONUCLEASE J 1 683 - -
Mtr4g3712 686 Pfam Beta-lactamase superfamily domain 106 241 IPR001279 -
Mtr4g3712 686 PANTHER RNA-METABOLISING METALLO-BETA-LACTAMASE 1 683 - -
Mtr4g3712 686 Gene3D - 86 498 IPR036866 -
Mtr4g3712 686 SMART Lactamase_B_5a 94 291 IPR001279 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3712 Mtr-Chr4 50871379 50879475 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3712 - - gmx:100814619 1147.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3712 4 50871379 50879475 Mtr3g2361 3 37445120 37454451 PCT