Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3710 ATGGTTGATGTTCATCATACTGATAAGCTCCAGGAATCTGAAGCCAAGTTTGGATTTATTGTCATGGATTACAATGGCGCTGTGTTTGGGACCTTGAGTGGCAATACAAGAGAAGTGCTTCACAAGTTCGTTGTATATCTTCCAAAGAAATATGGAAGAGGAGGGGTACCAGTCCTACGGTTTTCCCGTGTTCGTATGGAGAAACGTCATAACTATGTGAAGAAGACTGTTGACCTTGCAACACAGTTCTATATCAATCCTGCTACCAGCCAGCCTAATGTTTCTGGATTAATACTTGCTGGTTCTGCTGATTTCAAAACTGAGCTTAGTCAGTCAGATATGTTTGATCCCCGTCTTCAGGCAAAAGTACTTGGTGTTGTAGATGTATCCTATGGAGGGGAGTATGGATTTAATCAGGCTATTGAACTATCTTCTGAAATTCTGTCCAAAGCAAATTTTACTCAGGAGAAATGCTTGAGTGAATAA 486 0.4074 MVDVHHTDKLQESEAKFGFIVMDYNGAVFGTLSGNTREVLHKFVVYLPKKYGRGGVPVLRFSRVRMEKRHNYVKKTVDLATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKVLGVVDVSYGGEYGFNQAIELSSEILSKANFTQEKCLSE* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3710 161 Gene3D eRF1 domain 2 57 150 IPR042226 -
Mtr4g3710 161 Gene3D eRF1 domain 2 14 55 IPR042226 -
Mtr4g3710 161 Pfam eRF1 domain 2 16 149 IPR005141 -
Mtr4g3710 161 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 7 159 IPR004403 GO:0003747|GO:0006415
Mtr4g3710 161 SUPERFAMILY Translational machinery components 16 148 - -
Mtr4g3710 161 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 7 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3710 Mtr-Chr4 50849801 50851296 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3710 6 159 Eukaryotic Initiation Factors Gene Family AT1G12920 78.981 5.96e-85 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3710 K03265 - mtr:MTR_4g103730 322.398